(Q30385764)

6 November 2017

1 reference

title

Potentials 'R' Us web-server for protein energy estimations with coarse-grained knowledge-based potentials (English)

1 reference

6 November 2017

3

Robert L Jernigan

1 reference

6 November 2017

2

Andrzej Kloczkowski

1 reference

6 November 2017

Yaping Feng

1

1 reference

6 November 2017

17 February 2010

1 reference

6 November 2017

1 reference

6 November 2017

11

1 reference

6 November 2017

92

1 reference

Comparative modeling for protein structure prediction

6 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098114

Inferring ideal amino acid interaction forms from statistical protein contact potentials

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098114

Prediction of protein structure by emphasizing local side-chain/backbone interactions in ensembles of turn fragments

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098114

Rosetta predictions in CASP5: successes, failures, and prospects for complete automation.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098114

Recent improvements in prediction of protein structure by global optimization of a potential energy function.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098114

Decoys 'R' Us: a database of incorrect conformations to improve protein structure prediction

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098114

Ab initio construction of protein tertiary structures using a hierarchical approach

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098114

Effective energy functions for protein structure prediction.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098114

Short-range conformational energies, secondary structure propensities, and recognition of correct sequence-structure matches

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098114

Computational studies of protein folding

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098114

Structure of the C-terminal domain of the ribosomal protein L7/L12 from Escherichia coli at 1.7 A

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098114

Four-body contact potentials derived from two protein datasets to discriminate native structures from decoys.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098114

Combination of threading potentials and sequence profiles improves fold recognition.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098114

Residue-residue potentials with a favorable contact pair term and an unfavorable high packing density term, for simulation and threading.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098114

Predicting interresidue contacts using templates and pathways

26 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20163737

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-11-92

1 reference

6 November 2017

journals/bmcbi/FengKJ10

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

0 references

1 reference

PMC publication ID

3098114

6 November 2017

PubMed publication ID

20163737

1 reference

PMC publication ID

3098114