(Q30395794)

22 September 2017

CATH: an expanded resource to predict protein function through structure and sequence (English)

1 reference

protein function prediction

22 September 2017

0 references

8

Ian Sillitoe

1 reference

22 September 2017

7

Christine A Orengo

1 reference

22 September 2017

4

Jonathan G Lees

1 reference

22 September 2017

1

Natalie L Dawson

1 reference

22 September 2017

3

Sayoni Das

1 reference

22 September 2017

Tony E Lewis

2

1 reference

22 September 2017

David Lee

series ordinal

5

1 reference

22 September 2017

Paul Ashford

series ordinal

6

1 reference

22 September 2017

language of work or name

English

0 references

publication date

28 November 2016

1 reference

22 September 2017

Nucleic Acids Research

1 reference

22 September 2017

45

1 reference

22 September 2017

D1

1 reference

22 September 2017

D289-D295

1 reference

Creative Commons Attribution 4.0 International

22 September 2017

start time

2 December 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

An expanded evaluation of protein function prediction methods shows an improvement in accuracy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210570

MSAViewer: interactive JavaScript visualization of multiple sequence alignments

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210570

The Ensembl gene annotation system

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210570

Novel Computational Protocols for Functionally Classifying and Characterising Serine Beta-Lactamases

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210570

Large-Scale Analysis Exploring Evolution of Catalytic Machineries and Mechanisms in Enzyme Superfamilies

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210570

Gene3D: expanding the utility of domain assignments

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210570

Functional classification of CATH superfamilies: a domain-based approach for protein function annotation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210570

HMMER web server: 2015 update

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210570

3Dmol.js: molecular visualization with WebGL.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210570

The RCSB Protein Data Bank: views of structural biology for basic and applied research and education

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210570

CATH: comprehensive structural and functional annotations for genome sequences.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210570

UniProt: a hub for protein information

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210570

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210570

CD-HIT: accelerated for clustering the next-generation sequencing data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210570

BLAST+: architecture and applications

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210570

GeMMA: functional subfamily classification within superfamilies of predicted protein structural domains

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210570

Improving classification in protein structure databases using text mining.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210570

Profile Comparer: a program for scoring and aligning profile hidden Markov models

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210570

TM-align: a protein structure alignment algorithm based on the TM-score

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210570

Comprehensive evaluation of protein structure alignment methods: scoring by geometric measures.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210570

Scoring residue conservation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210570

Gene ontology: tool for the unification of biology

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210570

SSAP: sequential structure alignment program for protein structure comparison

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210570

Cytoscape: Software for Visualization and Analysis of Biological Networks

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5210570

26 November 2018

Identifiers

DOI

10.1093/NAR/GKW1098

1 reference

journals/nar/DawsonLDLLAOS17

22 September 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

22 September 2017

PubMed publication ID

27899584

1 reference