(Q30405503)

2 September 2017

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title

The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications (English)

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2 September 2017

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2nd DBCLS BioHackathon

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2

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2 September 2017

Kiyoko F Aoki-Kinoshita

12

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2 September 2017

43

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47

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2 September 2017

32

Alberto Labarga

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2 September 2017

Shin Kawano

10

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José M. Fernández

José M Fernández

16

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Shuichi Kawashima

Shuichi Kawashima

5

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Atsuko Yamaguchi

Atsuko Yamaguchi

9

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Kazuharu Arakawa

Kazuharu Arakawa

13

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Toshiaki Katayama

1

Toshiaki Katayama

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2 September 2017

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44

Keiichiro Ono

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2 September 2017

41

Tom Oinn

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2 September 2017

54

Chisato Yamasaki

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2 September 2017

52

James Taylor

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2 September 2017

7

Yasunori Yamamoto

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2 September 2017

14

Bruno Aranda

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2 September 2017

Takeshi Kawashima

4

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2 September 2017

Mitsuteru Nakao

6

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2 September 2017

Hong-Woo Chun

8

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2 September 2017

Jan Aerts

11

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2 September 2017

Raoul Jp Bonnal

15

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2 September 2017

Takatomo Fujisawa

17

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2 September 2017

Paul Mk Gordon

18

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2 September 2017

Naohisa Goto

19

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2 September 2017

Syed Haider

20

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2 September 2017

Todd Harris

21

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2 September 2017

Takashi Hatakeyama

22

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2 September 2017

Isaac Ho

23

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2 September 2017

Masumi Itoh

24

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2 September 2017

Nobuhiro Kido

26

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2 September 2017

Young-Joo Kim

27

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2 September 2017

Akira R Kinjo

28

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2 September 2017

Fumikazu Konishi

29

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2 September 2017

Yulia Kovarskaya

30

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2 September 2017

Greg von Kuster

31

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2 September 2017

Vachiranee Limviphuvadh

33

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2 September 2017

Luke McCarthy

34

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2 September 2017

Yasukazu Nakamura

35

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2 September 2017

Yunsun Nam

36

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2 September 2017

Kozo Nishida

37

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2 September 2017

Kunihiro Nishimura

38

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2 September 2017

Tatsuya Nishizawa

39

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2 September 2017

Soichi Ogishima

40

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2 September 2017

Shinobu Okamoto

42

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2 September 2017

Kazuki Oshita

45

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2 September 2017

Keun-Joon Park

46

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2 September 2017

Martin Senger

48

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2 September 2017

Jessica Severin

49

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2 September 2017

Yasumasa Shigemoto

50

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2 September 2017

Hideaki Sugawara

51

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2 September 2017

Oswaldo Trelles

53

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2 September 2017

Riu Yamashita

55

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2 September 2017

Noriyuki Satoh

56

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2 September 2017

Toshihisa Takagi

57

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2 September 2017

2 August 2011

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Journal of Biomedical Semantics

2 September 2017

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2 September 2017

2

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2 September 2017

4

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describes a project that uses

2 September 2017

Cytoscape

Cytoscape

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

SADI, SHARE, and the in silico scientific method

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. The DBCLS BioHackathon Consortium*

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

MOWServ: a web client for integration of bioinformatic resources.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

TogoWS: integrated SOAP and REST APIs for interoperable bioinformatics Web services

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

Galaxy: a web-based genome analysis tool for experimentalists

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

jORCA: easily integrating bioinformatics Web Services

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

H-InvDB in 2009: extended database and data mining resources for human genes and transcripts

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

DBTSS provides a tissue specific dynamic view of Transcription Start Sites

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

KEGG for representation and analysis of molecular networks involving diseases and drugs

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

Web API for biology with a workflow navigation system

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

Genome Projector: zoomable genome map with multiple views

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

Moby and Moby 2: creatures of the deep (web).

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

BioMart--biological queries made easy

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

McKusick's Online Mendelian Inheritance in Man (OMIM)

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

Introducing meta-services for biomedical information extraction

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

Blast2GO: A comprehensive suite for functional analysis in plant genomics

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

KEGG for linking genomes to life and the environment

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

Integration of biological networks and gene expression data using Cytoscape

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

KAAS: an automatic genome annotation and pathway reconstruction server

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

Taverna: a tool for building and running workflows of services

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

FESD: a Functional Element SNPs Database in human

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

UniProt: the Universal Protein knowledgebase

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

Cytoscape: a software environment for integrated models of biomolecular interaction networks

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

G-language Genome Analysis Environment: a workbench for nucleotide sequence data mining

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

BioMOBY: an open source biological web services proposal

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

The generic genome browser: a building block for a model organism system database

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

The distributed annotation system

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

Basic local alignment search tool

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

FANTOM4 EdgeExpressDB: an integrated database of promoters, genes, microRNAs, expression dynamics and regulatory interactions

20 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F2041-1480-2-4

Integrated tools for biomolecular sequence-based function prediction as exemplified by the ANNOTATOR software environment

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

Dasty2, an Ajax protein DAS client

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3170566

26 November 2018

Identifiers

DOI

10.1186/2041-1480-2-4

1 reference

journals/biomedsem/KatayamaWV11

2 September 2017

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/2041-1480-2-4

Fatcat ID

release_k7sl6kqe55h2jmb2tz4a53nqs4

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/k7sl6kqe55h2jmb2tz4a53nqs4

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

2 September 2017

PubMed publication ID

21806842

1 reference