(Q30412052)

29 September 2017

Diarrhea in young children from low-income countries leads to large-scale alterations in intestinal microbiota composition (English)

1 reference

29 September 2017

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1

1 reference

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11

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29 September 2017

Alan W Walker

2

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Robert F Breiman

31

Robert F Breiman

1 reference

29 September 2017

34

James P Nataro

1 reference

29 September 2017

John Benjamin Ochieng

25

John B Ochieng

1 reference

29 September 2017

8

Boubou Tamboura

1 reference

29 September 2017

16

Karen Kotloff

1 reference

29 September 2017

Dilruba Ahmed

20

0 references

Julian Parkhill

33

Julian Parkhill

1 reference

29 September 2017

14

Myron M Levine

1 reference

29 September 2017

Joseph Paulson

3

1 reference

29 September 2017

Brianna Lindsay

4

1 reference

29 September 2017

Martin Antonio

5

1 reference

29 September 2017

M Anowar Hossain

6

1 reference

29 September 2017

Joseph Oundo

7

1 reference

29 September 2017

Volker Mai

9

1 reference

29 September 2017

Irina Astrovskaya

10

1 reference

29 September 2017

Richard Rance

12

1 reference

29 September 2017

Mark Stares

13

1 reference

29 September 2017

Sandra Panchalingam

15

1 reference

29 September 2017

Usman N Ikumapayi

17

1 reference

29 September 2017

Chinelo Ebruke

18

1 reference

29 September 2017

Mitchell Adeyemi

19

1 reference

29 September 2017

Firoz Ahmed

21

1 reference

29 September 2017

Meer Taifur Alam

22

1 reference

29 September 2017

Ruhul Amin

23

1 reference

29 September 2017

Sabbir Siddiqui

24

1 reference

29 September 2017

Emmanuel Ouma

26

1 reference

29 September 2017

Jane Juma

27

1 reference

29 September 2017

Euince Mailu

28

1 reference

29 September 2017

Richard Omore

29

1 reference

29 September 2017

J Glenn Morris

30

1 reference

29 September 2017

Debasish Saha

32

1 reference

29 September 2017

O Colin Stine

35

1 reference

29 September 2017

27 June 2014

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29 September 2017

1 reference

29 September 2017

15

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6

1 reference

29 September 2017

R76

1 reference

describes a project that uses

29 September 2017

Cytoscape

Cytoscape

2 references

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

based on heuristic

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

exact match

https://scigraph.springernature.com/pub.10.1186/gb-2014-15-6-r76

0 references

cites work

Differential abundance analysis for microbial marker-gene surveys

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Etiology of diarrhea in Bangladeshi infants in the first year of life analyzed using molecular methods

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Survey of culture, goldengate assay, universal biosensor assay, and 16S rRNA Gene sequencing as alternative methods of bacterial pathogen detection

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Dynamics of fecal microbial communities in children with diarrhea of unknown etiology and genomic analysis of associated Streptococcus lutetiensis

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Burden and aetiology of diarrhoeal disease in infants and young children in developing countries (the Global Enteric Multicenter Study, GEMS): a prospective, case-control study

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Quantitative PCR for detection of Shigella improves ascertainment of Shigella burden in children with moderate-to-severe diarrhea in low-income countries

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Distinct distal gut microbiome diversity and composition in healthy children from Bangladesh and the United States

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Intestinal microbiota containing Barnesiella species cures vancomycin-resistant Enterococcus faecium colonization.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Global and regional mortality from 235 causes of death for 20 age groups in 1990 and 2010: a systematic analysis for the Global Burden of Disease Study 2010

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Diagnostic microbiologic methods in the GEMS-1 case/control study

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

The Global Enteric Multicenter Study (GEMS) of diarrheal disease in infants and young children in developing countries: epidemiologic and clinical methods of the case/control study

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

The Global Enteric Multicenter Study (GEMS): impetus, rationale, and genesis

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Targeted restoration of the intestinal microbiota with a simple, defined bacteriotherapy resolves relapsing Clostridium difficile disease in mice

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Inferring correlation networks from genomic survey data

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Therapeutic modulation of intestinal dysbiosis

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Human gut microbiome viewed across age and geography

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

A framework for human microbiome research

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Improved detection of bifidobacteria with optimised 16S rRNA-gene based pyrosequencing

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Estimating diarrhea mortality among young children in low and middle income countries

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Linking long-term dietary patterns with gut microbial enterotypes

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

DNACLUST: accurate and efficient clustering of phylogenetic marker genes

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

UCHIME improves sensitivity and speed of chimera detection

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Enterotypes of the human gut microbiome

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Succession of microbial consortia in the developing infant gut microbiome

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Vaginal microbiome of reproductive-age women

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Asymptomatic colonization by Clostridium difficile in infants: implications for disease in later life

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Global, regional, and national causes of child mortality in 2008: a systematic analysis

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

QIIME allows analysis of high-throughput community sequencing data

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Alignment and clustering of phylogenetic markers--implications for microbial diversity studies

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

A human gut microbial gene catalogue established by metagenomic sequencing

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Identifying biologically relevant differences between metagenomic communities

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Lactobacillus saerimneri and Lactobacillus ruminis: novel human-derived probiotic strains with immunomodulatory activities

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

A microbial symbiosis factor prevents intestinal inflammatory disease

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Critical evaluation of two primers commonly used for amplification of bacterial 16S rRNA genes

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Integration of biological networks and gene expression data using Cytoscape

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Diversity of the human gastrointestinal tract microbiota revisited.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Accuracy and quality of massively parallel DNA pyrosequencing

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Development of the human infant intestinal microbiota

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Colonic microbiota signatures across five northern European countries

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Bacterial diversity promotes community stability and functional resilience after perturbation

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

The diversity-stability debate

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Influences of microbiota on intestinal immune system development

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Developmental microbial ecology of the neonatal gastrointestinal tract

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Enterotoxigenic Bacteroides fragilis

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4072981

Influence of early gut microbiota on the maturation of childhood mucosal and systemic immune responses

14 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FGB-2014-15-6-R76

Faecal transplantation for recurrent C difficile diarrhoea

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24995464

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/GB-2014-15-6-R76

1 reference

29 September 2017

1 reference

29 September 2017

1 reference