(Q30454503)

21 June 2017

De novo transcriptome assembly and polymorphism detection in the flowering plant Silene vulgaris (Caryophyllaceae). (English)

1 reference

21 June 2017

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Silene vulgaris

1 reference

Caryophyllaceae

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Brian J Sanderson

4

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Andrea E Berardi

object named as

Andrea E Berardi

series ordinal

3

0 references

Stephen R Keller

series ordinal

2

object named as

Stephen R Keller

1 reference

21 June 2017

6

Douglas R Taylor

1 reference

21 June 2017

Daniel B Sloan

1

1 reference

PubMed ID

21999839

21 June 2017

John F Karpovich

series ordinal

5

1 reference

21 June 2017

17 October 2011

1 reference

Molecular Ecology Resources

21 June 2017

1 reference

21 June 2017

12

1 reference

21 June 2017

2

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21 June 2017

333-343

1 reference

Comparative 454 pyrosequencing of transcripts from two olive genotypes during fruit development

21 June 2017

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

De novo transcriptome characterization and development of genomic tools for Scabiosa columbaria L. using next-generation sequencing techniques.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Transcriptomic signatures of ash (Fraxinus spp.) phloem

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Comparison of the transcriptomes of American chestnut (Castanea dentata) and Chinese chestnut (Castanea mollissima) in response to the chestnut blight infection

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Variation in mutation rate and polymorphism among mitochondrial genes of Silene vulgaris

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Plant disease resistance protein signaling: NBS-LRR proteins and their partners

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Combining next-generation pyrosequencing with microarray for large scale expression analysis in non-model species

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Paternal leakage and heteroplasmy of mitochondrial genomes in Silene vulgaris: evidence from experimental crosses

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Silene as a model system in ecology and evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae)

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Comparative high-throughput transcriptome sequencing and development of SiESTa, the Silene EST annotation database

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Molecular characterization and detection of Vicia cryptic virus in different Vicia faba cultivars

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

eFloras: New Directions for Online Floras Exemplified by the Flora of China Project

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Characterization of duplicate gene evolution in the recent natural allopolyploid Tragopogon miscellus by next-generation sequencing and Sequenom iPLEX MassARRAY genotyping.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

BLAST+: architecture and applications

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea [Cajanus cajan (L.) Millspaugh].

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

msatcommander: detection of microsatellite repeat arrays and automated, locus-specific primer design

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Comprehensive transcriptome analysis of the highly complex Pisum sativum genome using next generation sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

OrchidBase: a collection of sequences of the transcriptome derived from orchids

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Selection patterns on restorer-like genes reveal a conflict between nuclear and mitochondrial genomes throughout angiosperm evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

The next generation of molecular markers from massively parallel sequencing of pooled DNA samples

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Nonneutral evolution of organelle genes in Silene vulgaris

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

CD-HIT Suite: a web server for clustering and comparing biological sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Genealogical evidence for epidemics of selfish genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Transcriptome sequencing of lentil based on second-generation technology permits large-scale unigene assembly and SSR marker discovery

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Genomic admixture increases fitness during a biological invasion

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Adaptation and colonization history affect the evolution of clines in two introduced species

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

PoPoolation: a toolbox for population genetic analysis of next generation sequencing data from pooled individuals

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Comparing de novo assemblers for 454 transcriptome data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Phylogenetic evidence of host-specific cryptic species in the anther smut fungus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Fast and accurate long-read alignment with Burrows-Wheeler transform

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

The Sequence Alignment/Map format and SAMtools

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

The sequence and de novo assembly of the giant panda genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

De novo sequencing and characterization of floral transcriptome in two species of buckwheat (Fagopyrum).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Comparative functional genomic analysis of Solanum glandular trichome types.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

RNA-seq: technical variability and sampling.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Sequencing and de novo analysis of a coral larval transcriptome using 454 GSFlx

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

A White Campion (Silene latifolia) floral expressed sequence tag (EST) library: annotation, EST-SSR characterization, transferability, and utility for comparative mapping

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

A genomic view of alternative splicing

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Permanent Genetic Resources added to Molecular Ecology Resources Database 1 August 2009-30 September 2009.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Permanent Genetic Resources added to Molecular Ecology Resources Database 1 October 2009-30 November 2009.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

High-throughput gene and SNP discovery in Eucalyptus grandis, an uncharacterized genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Mitochondrial DNA diversity, population structure, and gender association in the gynodioecious plant Silene vulgaris

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Characterization of the horseweed (Conyza canadensis) transcriptome using GS-FLX 454 pyrosequencing and its application for expression analysis of candidate non-target herbicide resistance genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Cophylogeny of the anther smut fungi and their caryophyllaceous hosts: prevalence of host shifts and importance of delimiting parasite species for inferring cospeciation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

A garter snake transcriptome: pyrosequencing, de novo assembly, and sex-specific differences

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

The population genomics of plant adaptation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Heterogeneity of rDNA distribution and genome size in Silene spp.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Maximized virulence in a sterilizing pathogen: the anther-smut fungus and its co-evolved hosts

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Extensive loss of translational genes in the structurally dynamic mitochondrial genome of the angiosperm Silene latifolia.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Polyploidy and angiosperm diversification

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

The Bioperl toolkit: Perl modules for the life sciences

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Combining population genomics and quantitative genetics: finding the genes underlying ecologically important traits.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

De novo sequencing and analysis of the American ginseng root transcriptome using a GS FLX Titanium platform to discover putative genes involved in ginsenoside biosynthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Mikimopine synthase (mis) gene on pRi1724.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Analysis of leaf and root transcriptomes of soil-grown Avena barbata plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Historical range expansion determines the phylogenetic diversity introduced during contemporary species invasion

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

High prevalence of multiple paternity within fruits in natural populations of Silene latifolia, as revealed by microsatellite DNA analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

The effect of breeding system on polymorphism in mitochondrial genes of Silene.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Rapid transcriptome characterization for a nonmodel organism using 454 pyrosequencing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Comparison of next generation sequencing technologies for transcriptome characterization

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Global characterization of Artemisia annua glandular trichome transcriptome using 454 pyrosequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Rapidly developing functional genomics in ecological model systems via 454 transcriptome sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Development of a EST dataset and characterization of EST-SSRs in a traditional Chinese medicinal plant, Epimedium sagittatum (Sieb. Et Zucc.) Maxim

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Identification of ovule transcripts from the Apospory-Specific Genomic Region (ASGR)-carrier chromosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

Inheritance of chloroplast DNA is not strictly maternal in Silene vulgaris (Caryophyllaceae): evidence from experimental crosses and natural populations

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1755-0998.2011.03079.X

10.1111/J.1755-0998.2011.03079.X

21 January 2018

Identifiers

DOI

1 reference

21 June 2017

1 reference

PubMed ID

21999839