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GUIDANCE: a web server for assessing alignment confidence scores.
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scholarly article
1 reference
stated in
Europe PubMed Central
PMCID
2896199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20497997%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
title
GUIDANCE: a web server for assessing alignment confidence scores
(English)
1 reference
stated in
Europe PubMed Central
PMCID
2896199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20497997%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
main subject
web server
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inferred from title
author
Giddy Landan
series ordinal
4
1 reference
stated in
Europe PubMed Central
PMCID
2896199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20497997%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
Haim Ashkenazy
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3
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stated in
Europe PubMed Central
PMCID
2896199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20497997%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
Tal Pupko
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6
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Europe PubMed Central
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2896199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20497997%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
Eyal Privman
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2
object named as
Eyal Privman
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Europe PubMed Central
PMCID
2896199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20497997%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
Osnat Penn
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1
object named as
Osnat Penn
1 reference
stated in
Europe PubMed Central
PMCID
2896199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20497997%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
author name string
Dan Graur
series ordinal
5
1 reference
stated in
Europe PubMed Central
PMCID
2896199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20497997%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
language of work or name
English
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publication date
23 May 2010
1 reference
stated in
Europe PubMed Central
PMCID
2896199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20497997%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
published in
Nucleic Acids Research
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Europe PubMed Central
PMCID
2896199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20497997%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
volume
38
1 reference
stated in
Europe PubMed Central
PMCID
2896199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20497997%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
issue
Web Server issue
1 reference
stated in
Europe PubMed Central
PMCID
2896199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20497997%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
page(s)
W23-8
1 reference
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Europe PubMed Central
PMCID
2896199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20497997%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
copyright license
Creative Commons Attribution-NonCommercial 2.5 Generic
start time
4 October 2016
1 reference
stated in
April 2022 Public Data File from Crossref
copyright status
copyrighted
0 references
cites work
Estimates of positive Darwinian selection are inflated by errors in sequencing, annotation, and alignment.
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An alignment confidence score capturing robustness to guide tree uncertainty
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Role of HIV-1 Vpu protein for virus spread and pathogenesis
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LOCAL RELIABILITY MEASURES FROM SETS OF CO-OPTIMAL MULTIPLE SEQUENCE ALIGNMENTS
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Alignment uncertainty and genomic analysis
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Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments
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Automatic assessment of alignment quality
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896199
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An algorithm for progressive multiple alignment of sequences with insertions
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ConSurf 2005: the projection of evolutionary conservation scores of residues on protein structures
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CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
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based on heuristic
inferred from PubMed ID database lookup
Heads or tails: a simple reliability check for multiple sequence alignments
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/20497997
retrieved
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based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1093/NAR/GKQ443
1 reference
stated in
Europe PubMed Central
PMCID
2896199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20497997%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
DBLP publication ID
journals/nar/PennPALGP10
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
PMCID
2896199
1 reference
stated in
Europe PubMed Central
PMCID
2896199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20497997%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
PubMed ID
20497997
1 reference
stated in
Europe PubMed Central
PMCID
2896199
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20497997%20AND%20SRC:MED&resulttype=core&format=json
retrieved
3 February 2020
ResearchGate publication ID
44626045
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