(Q30500770)

19 October 2017

Systems-wide temporal proteomic profiling in glucose-starved Bacillus subtilis (English)

1 reference

19 October 2017

Bacillus subtilis

1 reference

inferred from title

author

Florian-Alexander Herbst

5

1 reference

19 October 2017

8

1 reference

19 October 2017

9

Michael Hecker

1 reference

19 October 2017

Andreas Otto

1

1 reference

19 October 2017

Jörg Bernhardt

2

1 reference

19 October 2017

Hanna Meyer

3

1 reference

19 October 2017

Marc Schaffer

4

1 reference

19 October 2017

Juliane Siebourg

6

1 reference

19 October 2017

Ulrike Mäder

7

1 reference

19 October 2017

Dörte Becher

10

1 reference

19 October 2017

language of work or name

English

0 references

publication date

1 January 2010

1 reference

19 October 2017

Nature Communications

1 reference

19 October 2017

1

1 reference

19 October 2017

137

1 reference

Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported

19 October 2017

start time

1 December 2010

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

A community-curated consensual annotation that is continuously updated: the Bacillus subtilis centred wiki SubtiWiki

1 reference

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A proteomic view of an important human pathogen--towards the quantification of the entire Staphylococcus aureus proteome

20 June 2018

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Delayed correlation of mRNA and protein expression in rapamycin-treated cells and a role for Ggc1 in cellular sensitivity to rapamycin

20 June 2018

1 reference

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A comprehensive proteomics and transcriptomics analysis of Bacillus subtilis salt stress adaptation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Metabolic fluxes during strong carbon catabolite repression by malate in Bacillus subtilis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Membrane proteins and proteomics: love is possible, but so difficult

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Complementary analysis of the vegetative membrane proteome of the human pathogen Staphylococcus aureus

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

A quantitative analysis software tool for mass spectrometry-based proteomics

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

The Bacillus subtilis sigma(M) regulon and its contribution to cell envelope stress responses

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Control of key metabolic intersections in Bacillus subtilis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Clp-dependent proteolysis down-regulates central metabolic pathways in glucose-starved Bacillus subtilis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Towards the entire proteome of the model bacterium Bacillus subtilis by gel-based and gel-free approaches

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

REQUIREMENTS FOR TRANSFORMATION IN BACILLUS SUBTILIS

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Proteomic profiling of cell envelope-associated proteins from Staphylococcus aureus

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

High- and low-threshold genes in the Spo0A regulon of Bacillus subtilis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Towards a comprehensive understanding of Bacillus subtilis cell physiology by physiological proteomics

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

A comprehensive proteome map of growing Bacillus subtilis cells

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Proteomics of protein secretion by Bacillus subtilis: separating the "secrets" of the secretome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

A correlation algorithm for the automated quantitative analysis of shotgun proteomics data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Proteomic analysis of acrylamide gel separated proteins immobilized on polyvinylidene difluoride membranes following proteolytic digestion in the presence of 80% acetonitrile

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: the yeast proteome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Bacillus subtilis during feast and famine: visualization of the overall regulation of protein synthesis during glucose starvation by proteome analysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

The human plasma proteome: history, character, and diagnostic prospects

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Stabilization of cell wall proteins in Bacillus subtilis: a proteomic approach

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Bacillus subtilis functional genomics: global characterization of the stringent response by proteome and transcriptome analysis.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Bacillus subtilis metabolism and energetics in carbon-limited and excess-carbon chemostat culture

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

A proteomic view on genome-based signal peptide predictions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Membrane proteins and proteomics: un amour impossible?

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

KEGG: kyoto encyclopedia of genes and genomes

20 June 2018

1 reference

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A database for post-genome analysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Transcriptional regulation of Bacillus subtilis citrate synthase genes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Regulation of the transport system for C4-dicarboxylic acids in Bacillus subtilis.

20 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNCOMMS1137

Stable isotope labeling by amino acids in cell culture (SILAC) applied to quantitative proteomics of Bacillus subtilis

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Quantitative cell surface proteome profiling for SigB-dependent protein expression in the human pathogen Staphylococcus aureus via biotinylation approach

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Connecting parts with processes: SubtiWiki and SubtiPathways integrate gene and pathway annotation for Bacillus subtilis

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Proteolysis during long-term glucose starvation in Staphylococcus aureus COL.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

From complementarity to comprehensiveness--targeting the membrane proteome of growing Bacillus subtilis by divergent approaches

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Monitoring of changes in the membrane proteome during stationary phase adaptation of Bacillus subtilis using in vivo labeling techniques

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

LocateP: genome-scale subcellular-location predictor for bacterial proteins

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Statistical Analysis of Membrane Proteome Expression Changes inSaccharomycescerevisiae

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Genome-wide mRNA profiling in glucose starved Bacillus subtilis cells

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

The Bacillus subtilis ywkA gene encodes a malic enzyme and its transcription is activated by the YufL/YufM two-component system in response to malate

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Cannibalism by sporulating bacteria

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3105300

Temporal activation of -glucanase synthesis in Bacillus subtilis is mediated by the GTP pool

26 November 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNCOMMS1137

Ribonucleoprotein Particles from Escherichia Coli

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21266987

12 December 2020

inferred from PubMed ID database lookup

Proteome analysis of Bacillus subtilis extracellular proteins: a two-dimensional protein electrophoretic study

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21266987

12 December 2020

inferred from PubMed ID database lookup

The CitST two-component system regulates the expression of the Mg-citrate transporter in Bacillus subtilis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21266987

12 December 2020

inferred from PubMed ID database lookup

Tree visualization with tree-maps: 2-d space-filling approach

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNCOMMS1137

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1038/NCOMMS1137

1 reference

Dimensions Publication ID

19 October 2017

0 references

0 references

0 references

1 reference

19 October 2017

PubMed publication ID

21266987

1 reference