(Q30576104)

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Collaborative dynamic DNA scanning by nucleotide excision repair proteins investigated by single- molecule imaging of quantum-dot-labeled proteins

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Europe PubMed Central

PMC publication ID

22 August 2017

Collaborative dynamic DNA scanning by nucleotide excision repair proteins investigated by single- molecule imaging of quantum-dot-labeled proteins (English)

1 reference

Europe PubMed Central

PMC publication ID

22 August 2017

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Neil M Kad

1

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author name string

Hong Wang

2

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Europe PubMed Central

PMC publication ID

22 August 2017

Guy G Kennedy

3

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Europe PubMed Central

PMC publication ID

22 August 2017

David M Warshaw

4

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Europe PubMed Central

PMC publication ID

22 August 2017

Bennett Van Houten

5

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Europe PubMed Central

PMC publication ID

22 August 2017

publication date

1 March 2010

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Europe PubMed Central

PMC publication ID

22 August 2017

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Europe PubMed Central

PMC publication ID

22 August 2017

37

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Europe PubMed Central

PMC publication ID

22 August 2017

5

1 reference

Europe PubMed Central

PMC publication ID

22 August 2017

702-713

1 reference

Europe PubMed Central

PMC publication ID

22 August 2017

A Structural Model for the Damage-sensing Complex in Bacterial Nucleotide Excision Repair

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Single-molecule analysis reveals two separate DNA-binding domains in the Escherichia coli UvrA dimer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Visualizing one-dimensional diffusion of proteins along DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Crystal Structure of the FeS Cluster–Containing Nucleotide Excision Repair Helicase XPD

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Sliding and jumping of single EcoRV restriction enzymes on non-cognate DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Functional characterization and atomic force microscopy of a DNA repair protein conjugated to a quantum dot.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Tumor suppressor p53 slides on DNA with low friction and high stability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Crystal Structure of Bacillus stearothermophilus UvrA Provides Insight into ATP-Modulated Dimerization, UvrB Interaction, and DNA Binding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Dynamic basis for one-dimensional DNA scanning by the mismatch repair complex Msh2-Msh6.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Structure of the C-terminal half of UvrC reveals an RNase H endonuclease domain with an Argonaute-like catalytic triad

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

The C-terminal zinc finger of UvrA does not bind DNA directly but regulates damage-specific DNA binding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

A base-excision DNA-repair protein finds intrahelical lesion bases by fast sliding in contact with DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Prokaryotic nucleotide excision repair: the UvrABC system.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Long-distance lateral diffusion of human Rad51 on double-stranded DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

'Close-fitting sleeves': DNA damage recognition by the UvrABC nuclease system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Investigations of pyrimidine dimer glycosylases--a paradigm for DNA base excision repair enzymology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Structural insights into the first incision reaction during nucleotide excision repair

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Kinetics of protein-DNA interaction: facilitated target location in sequence-dependent potential

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Identification of residues within UvrB that are important for efficient DNA binding and damage processing.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Analyzing the handoff of DNA from UvrA to UvrB utilizing DNA-protein photoaffinity labeling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

A mutant heterodimeric myosin with one inactive head generates maximal displacement

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

The presence of two UvrB subunits in the UvrAB complex ensures damage detection in both DNA strands

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

How to get from A to B: strategies for analysing protein motion on DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Role of ATP hydrolysis by UvrA and UvrB during nucleotide excision repair

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

The xeroderma pigmentosum group D (XPD) gene: one gene, two functions, three diseases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Damage recognition in nucleotide excision repair of DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Crystal structure of Escherichia coli UvrB C-terminal domain, and a model for UvrB-uvrC interaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Crystal structure of UvrB, a DNA helicase adapted for nucleotide excision repair

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Crystal structure of Thermus thermophilus HB8 UvrB protein, a key enzyme of nucleotide excision repair

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Crystal structure of the DNA nucleotide excision repair enzyme UvrB from Thermus thermophilus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

The enzymatic biotinylation of proteins: a post-translational modification of exceptional specificity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

DNA excision repair

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Defects in the DNA repair and transcription gene ERCC2(XPD) in trichothiodystrophy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Visualization of single molecules of RNA polymerase sliding along DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

A novel repair enzyme: UVRABC excision nuclease of Escherichia coli cuts a DNA strand on both sides of the damaged region

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

On the specificity of DNA-protein interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Involvement of helicase II (uvrD gene product) and DNA polymerase I in excision mediated by the uvrABC protein complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

DNA repair enzymes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Effect of DNA polymerase I and DNA helicase II on the turnover rate of UvrABC excision nuclease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Facilitated target location in biological systems

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

The (A)BC excinuclease of Escherichia coli has only the UvrB and UvrC subunits in the incision complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Formation and enzymatic properties of the UvrB.DNA complex.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Dimerization of Escherichia coli UvrA and its binding to undamaged and ultraviolet light damaged DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

The one-dimensional diffusion coefficient of proteins absorbed on DNA. Hydrodynamic considerations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

20 June 2018

Dynamics of the UvrABC nucleotide excision repair proteins analyzed by fluorescence resonance energy transfer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

26 November 2018

Damage detection by the UvrABC pathway: crystal structure of UvrB bound to fluorescein-adducted DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

26 November 2018

UvrB domain 4, an autoinhibitory gate for regulation of DNA binding and ATPase activity.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

26 November 2018

Interstitial collagenase is a Brownian ratchet driven by proteolysis of collagen

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986923

26 November 2018

Structural basis for DNA recognition and processing by UvrB

1 reference

https://pubmed.ncbi.nlm.nih.gov/20227373

12 December 2020

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10.1016/J.MOLCEL.2010.02.003

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Europe PubMed Central

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22 August 2017

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22 August 2017

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22 August 2017

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