(Q30582835)

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Mutation of the RDR1 gene caused genome-wide changes in gene expression, regional variation in small RNA clusters and localized alteration in DNA methylation in rice

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Europe PubMed Central

PMC publication ID

13 October 2017

Mutation of the RDR1 gene caused genome-wide changes in gene expression, regional variation in small RNA clusters and localized alteration in DNA methylation in rice (English)

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

DNA methylation

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author name string

Ningning Wang

1

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Europe PubMed Central

PMC publication ID

13 October 2017

Di Zhang

2

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Europe PubMed Central

PMC publication ID

13 October 2017

Zhenhui Wang

3

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Europe PubMed Central

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13 October 2017

Hongwei Xun

4

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

Jian Ma

5

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

Hui Wang

6

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Europe PubMed Central

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13 October 2017

Wei Huang

7

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Europe PubMed Central

PMC publication ID

13 October 2017

Ying Liu

8

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

Xiuyun Lin

9

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Europe PubMed Central

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13 October 2017

Ning Li

10

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Europe PubMed Central

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13 October 2017

Xiufang Ou

11

1 reference

Europe PubMed Central

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13 October 2017

Chunyu Zhang

12

1 reference

Europe PubMed Central

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13 October 2017

Ming-Bo Wang

13

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Europe PubMed Central

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13 October 2017

Bao Liu

14

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Europe PubMed Central

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13 October 2017

language of work or name

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publication date

30 June 2014

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Europe PubMed Central

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13 October 2017

BMC Plant Biology

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Europe PubMed Central

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13 October 2017

14

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Europe PubMed Central

PMC publication ID

13 October 2017

177

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

Histone variants and chromatin assembly in plant abiotic stress responses.

1 reference

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20 June 2018

Evolutionary history of plant microRNAs

1 reference

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The role of hydrogen peroxide and nitric oxide in the induction of plant-encoded RNA-dependent RNA polymerase 1 in the basal defense against Tobacco mosaic virus

1 reference

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20 June 2018

Both OsRecQ1 and OsRDR1 are required for the production of small RNA in response to DNA-damage in rice

1 reference

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20 June 2018

Comprehensive analysis of silencing mutants reveals complex regulation of the Arabidopsis methylome.

1 reference

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20 June 2018

Transgenerational inheritance of modified DNA methylation patterns and enhanced tolerance induced by heavy metal stress in rice (Oryza sativa L.).

1 reference

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20 June 2018

Salt stress induced variation in DNA methylation pattern and its influence on gene expression in contrasting rice genotypes

1 reference

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20 June 2018

RNA silencing and plant viral diseases

1 reference

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20 June 2018

Transition of chromatin status during the process of recovery from drought stress in Arabidopsis thaliana.

1 reference

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20 June 2018

Multisubunit RNA polymerases IV and V: purveyors of non-coding RNA for plant gene silencing

1 reference

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20 June 2018

Transpositional reactivation of the Dart transposon family in rice lines derived from introgressive hybridization with Zizania latifolia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083042

20 June 2018

Diverse set of microRNAs are responsive to powdery mildew infection and heat stress in wheat (Triticum aestivum L.).

1 reference

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20 June 2018

High-performance quantification of mature microRNAs by real-time RT-PCR using deoxyuridine-incorporated oligonucleotides and hemi-nested primers

1 reference

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20 June 2018

RNAi-mediated viral immunity requires amplification of virus-derived siRNAs in Arabidopsis thaliana

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083042

20 June 2018

Tissue culture-induced transpositional activity of mPing is correlated with cytosine methylation in rice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083042

20 June 2018

RNA-mediated chromatin-based silencing in plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083042

20 June 2018

Epigenetic regulation of stress responses in plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083042

20 June 2018

The CaMV transactivator/viroplasmin interferes with RDR6-dependent trans-acting and secondary siRNA pathways in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083042

20 June 2018

A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083042

20 June 2018

RNA silencing in plants: yesterday, today, and tomorrow.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083042

20 June 2018

Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (nat-miRNAs).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083042

20 June 2018

Structural and genetic requirements for the biogenesis of tobacco rattle virus-derived small interfering RNAs.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083042

20 June 2018

Identification of novel and candidate miRNAs in rice by high throughput sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083042

20 June 2018

Nomenclature and functions of RNA-directed RNA polymerases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083042

20 June 2018

Real-time quantification of microRNAs by stem-loop RT-PCR

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083042

20 June 2018

siRNA and miRNA: an insight into RISCs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083042

20 June 2018

The population genetic theory of hidden variation and genetic robustness.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083042

20 June 2018

Endogenous trans-acting siRNAs regulate the accumulation of Arabidopsis mRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083042

20 June 2018

RNA silencing in plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083042

20 June 2018

RNA silencing: a conserved antiviral immunity of plants and animals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083042

20 June 2018

MicroRNAs: genomics, biogenesis, mechanism, and function

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083042

20 June 2018

RNA interference: listening to the sound of silence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083042

20 June 2018

Retrotransposons of rice involved in mutations induced by tissue culture

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083042

20 June 2018

Long noncoding RNAs responsive to Fusarium oxysporum infection in Arabidopsis thaliana.

1 reference

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26 November 2018

Widespread, abundant, and diverse TE-associated siRNAs in developing wheat grain

1 reference

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26 November 2018

NERD, a plant-specific GW protein, defines an additional RNAi-dependent chromatin-based pathway in Arabidopsis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083042

26 November 2018

Rice RNA-dependent RNA polymerase 6 acts in small RNA biogenesis and spikelet development.

1 reference

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1 reference

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26 November 2018

The influence of RNA-dependent RNA polymerase 1 on potato virus Y infection and on other antiviral response genes.

1 reference

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26 November 2018

Compromised virus-induced gene silencing in RDR6-deficient plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4083042

26 November 2018

Heritable alteration in DNA methylation induced by nitrogen-deficiency stress accompanies enhanced tolerance by progenies to the stress in rice (Oryza sativa L.).

1 reference

https://pubmed.ncbi.nlm.nih.gov/24980094

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNA-directed DNA methylation

1 reference

https://pubmed.ncbi.nlm.nih.gov/24980094

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2229-14-177

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

Dimensions Publication ID

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PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

13 October 2017

ResearchGate publication ID

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