(Q34326765)

1 August 2017

title

Salt stress induced variation in DNA methylation pattern and its influence on gene expression in contrasting rice genotypes (English)

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1 August 2017

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Ratna Karan

1

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author name string

Teresa DeLeon

series ordinal

2

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1 August 2017

Hanamareddy Biradar

series ordinal

3

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1 August 2017

Prasanta K Subudhi

series ordinal

4

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1 August 2017

language of work or name

English

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publication date

28 June 2012

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1 August 2017

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1 August 2017

volume

7

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1 August 2017

issue

6

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1 August 2017

page(s)

e40203

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Creative Commons Attribution 4.0 International

1 August 2017

copyright license

start time

28 June 2012

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

The progeny of Arabidopsis thaliana plants exposed to salt exhibit changes in DNA methylation, histone modifications and gene expression

1 reference

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Epigenetic contribution to stress adaptation in plants

6 July 2018

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Genome instability and epigenetic modification--heritable responses to environmental stress?

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386172

Drought-induced site-specific DNA methylation and its association with drought tolerance in rice (Oryza sativa L.).

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386172

Epigenetic variation in mangrove plants occurring in contrasting natural environment

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386172

Genome-wide evolutionary analysis of eukaryotic DNA methylation.

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386172

Compromised stability of DNA methylation and transposon immobilization in mosaic Arabidopsis epigenomes.

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386172

Tuning gene expression to changing environments: from rapid responses to evolutionary adaptation

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386172

DNA methylation landscapes: provocative insights from epigenomics

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386172

Large-scale survey of cytosine methylation of retrotransposons and the impact of readout transcription from long terminal repeats on expression of adjacent rice genes.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386172

Genetic and genomic approaches to develop rice germplasm for problem soils

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386172

Conserved domain structure of pentatricopeptide repeat proteins involved in chloroplast RNA editing

6 July 2018

1 reference

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The plant genome's methylation status and response to stress: implications for plant improvement

6 July 2018

1 reference

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Methyl-CpG-binding domain proteins in plants: interpreters of DNA methylation.

6 July 2018

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MOM1 mediates DNA-methylation-independent silencing of repetitive sequences in Arabidopsis

6 July 2018

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Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis

6 July 2018

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ROPs in the spotlight of plant signal transduction

6 July 2018

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DNA methylation and epigenetics

6 July 2018

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Epigenomics: beyond CpG islands.

6 July 2018

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Genes and transposons are differentially methylated in plants, but not in mammals

6 July 2018

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Epi-alleles in plants: inheritance of epigenetic information over generations

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386172

Constitutive overexpression of cystathionine gamma-synthase in Arabidopsis leads to accumulation of soluble methionine and S-methylmethionine

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386172

DNA methylation patterns and epigenetic memory

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386172

Surveying CpG methylation at 5'-CCGG in the genomes of rice cultivars

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386172

The wheat peptidyl prolyl cis-trans-isomerase FKBP77 is heat induced and developmentally regulated

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386172

Differences in DNA methylation patterns are detectable during the dimorphic transition of fungi by amplification of restriction polymorphisms

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386172

Effect of site-specific modification on restriction endonucleases and DNA modification methyltransferases

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386172

Rapid isolation of high molecular weight plant DNA

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386172

DNA methylation changes detected by methylation-sensitive amplified polymorphism in two contrasting rice genotypes under salt stress.

6 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0040203

Periodic DNA methylation in maize nucleosomes and demethylation by environmental stress

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0040203

Comparative transcriptional profiling of two contrasting rice genotypes under salinity stress during the vegetative growth stage

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0040203

Genome-wide transcriptional analysis of salinity stressed japonica and indica rice genotypes during panicle initiation stage

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0040203

DNA methylation profiling identifies CG methylation clusters in Arabidopsis genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0040203

The calcium sensor calcineurin B-like 9 modulates abscisic acid sensitivity and biosynthesis in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0040203

SET DOMAIN GROUP25 encodes a histone methyltransferase and is involved in FLOWERING LOCUS C activation and repression of flowering.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0040203

Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0040203

Tissue-specific differences in cytosine methylation and their association with differential gene expression in sorghum.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0040203

Body-methylated genes in Arabidopsis thaliana are functionally important and evolve slowly.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0040203

Histidine kinase and response regulator genes as they relate to salinity tolerance in rice

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0040203

CyMATE: a new tool for methylation analysis of plant genomic DNA after bisulphite sequencing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0040203

Genome-wide mapping of cytosine methylation revealed dynamic DNA methylation patterns associated with genes and centromeres in rice

21 January 2018

1 reference

12 December 2020

Abiotic-stress induces demethylation and transcriptional activation of a gene encoding a glycerophosphodiesterase-like protein in tobacco plants

1 reference

12 December 2020

Salinity tolerance of japonica and indica rice (Oryza sativa L.) at the seedling stage

1 reference

12 December 2020

Temperature shift coordinately changes the activity and the methylation state of transposon Tam3 in Antirrhinum majus

1 reference

12 December 2020

Heritable alteration in DNA methylation induced by nitrogen-deficiency stress accompanies enhanced tolerance by progenies to the stress in rice (Oryza sativa L.).

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0040203

Identifiers

DOI

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1 August 2017

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1 August 2017

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