(Q30583935)

English

Population transcriptomics with single-cell resolution: a new field made possible by microfluidics: a technology for high throughput transcript counting and data-driven definition of cell types

scientific article

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scholarly article

1 reference

Europe PubMed Central

17 October 2017

Population transcriptomics with single-cell resolution: a new field made possible by microfluidics: a technology for high throughput transcript counting and data-driven definition of cell types (English)

1 reference

Europe PubMed Central

17 October 2017

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transcriptomics

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based on heuristic

inferred from title

1

object named as

Charles Plessy

1 reference

Europe PubMed Central

17 October 2017

object named as

Piero Carninci

4

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author name string

Linda Desbois

2

1 reference

Europe PubMed Central

17 October 2017

Teruo Fujii

3

1 reference

Europe PubMed Central

17 October 2017

language of work or name

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publication date

27 December 2012

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Europe PubMed Central

17 October 2017

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Europe PubMed Central

17 October 2017

35

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Europe PubMed Central

17 October 2017

2

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Europe PubMed Central

17 October 2017

131-140

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Europe PubMed Central

17 October 2017

describes a project that uses

1 reference

based on heuristic

inferred from title

Single-cell systems biology by super-resolution imaging and combinatorial labeling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Monitoring single-cell bioenergetics via the coarsening of emulsion droplets

1 reference

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20 June 2018

Live imaging of nascent RNA dynamics reveals distinct types of transcriptional pulse regulation

1 reference

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20 June 2018

Method for physiologic phenotype characterization at the single-cell level in non-interacting and interacting cells.

1 reference

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20 June 2018

Using gene expression noise to understand gene regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Mesh-integrated microdroplet array for simultaneous merging and storage of single-cell droplets.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Transcription goes digital

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Sequestration of highly expressed mRNAs in cytoplasmic granules, P-bodies, and stress granules enhances cell viability

1 reference

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20 June 2018

Highly parallel genome-wide expression analysis of single mammalian cells

1 reference

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One-step detection of the 2009 pandemic influenza A(H1N1) virus by the RT-SmartAmp assay and its clinical validation

1 reference

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20 June 2018

Fluorescence detection methods for microfluidic droplet platforms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Counting absolute numbers of molecules using unique molecular identifiers

1 reference

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Regulation of the probability of mouse odorant receptor gene choice

1 reference

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1-Million droplet array with wide-field fluorescence imaging for digital PCR.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

High-throughput microfluidic single-cell RT-qPCR

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Quantification noise in single cell experiments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Cell type-specific transcriptomics in the brain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Characterization of the single-cell transcriptional landscape by highly multiplex RNA-seq

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Validating transcripts with probes and imaging technology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Drop-on-demand single cell isolation and total RNA analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

High-speed droplet generation on demand driven by pulse laser-induced cavitation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

NanoCAGE: a high-resolution technique to discover and interrogate cell transcriptomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Non-genetic heterogeneity from stochastic partitioning at cell division

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Defining cell populations with single-cell gene expression profiling: correlations and identification of astrocyte subpopulations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

High-throughput injection with microfluidics using picoinjectors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Quantifying E. coli Proteome and Transcriptome with Single-Molecule Sensitivity in Single Cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Amplification-free digital gene expression profiling from minute cell quantities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Digital PCR on a SlipChip

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Dynamics of microfluidic droplets

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Linking promoters to functional transcripts in small samples with nanoCAGE and CAGEscan

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Robust growth of Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Quantitative cell-based reporter gene assays using droplet-based microfluidics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

High-performance single cell genetic analysis using microfluidic emulsion generator arrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Ultrahigh-throughput screening in drop-based microfluidics for directed evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Droplet-based gene expression analysis using a device with magnetic force-based-droplet-handling system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Microfluidic isolation and transcriptome analysis of serum microvesicles

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

High-throughput droplet PCR.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Microdroplet-based PCR enrichment for large-scale targeted sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Tracking lineages of single cells in lines using a microfluidic device

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Direct RNA sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Population context determines cell-to-cell variability in endocytosis and virus infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Practical, microfabrication-free device for single-cell isolation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Droplet microfluidic technology for single-cell high-throughput screening

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Droplet-based microfluidic systems for high-throughput single DNA molecule isothermal amplification and analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Droplets for ultrasmall-volume analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Microwave dielectric heating of drops in microfluidic devices

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Reliable microfluidic on-chip incubation of droplets in delay-lines

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Static microdroplet arrays: a microfluidic device for droplet trapping, incubation and release for enzymatic and cell-based assays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Nanodroplet real-time PCR system with laser assisted heating

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Integrated microfluidic bioprocessor for single-cell gene expression analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Single-RNA counting reveals alternative modes of gene expression in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

The chemistrode: a droplet-based microfluidic device for stimulation and recording with high temporal, spatial, and chemical resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Controlled encapsulation of single-cells into monodisperse picolitre drops.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Quantification of mRNA in single cells and modelling of RT-qPCR induced noise

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Drop-based microfluidic devices for encapsulation of single cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Droplet-Based Microfluidic Platforms for the Encapsulation and Screening of Mammalian Cells and Multicellular Organisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Microfluidic high-throughput encapsulation and hydrodynamic self-sorting of single cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Direct multiplexed measurement of gene expression with color-coded probe pairs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Droplet microfluidics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

A microfluidic processor for gene expression profiling of single human embryonic stem cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

On-chip, real-time, single-copy polymerase chain reaction in picoliter droplets

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Stochastic mRNA synthesis in mammalian cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Single-cell enzyme concentrations, kinetics, and inhibition analysis using high-density hydrodynamic cell isolation arrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

BEAMing: single-molecule PCR on microparticles in water-in-oil emulsions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Genome sequencing in microfabricated high-density picolitre reactors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

RNA-conjugated template-switching RT-PCR method for generating an Escherichia coli cDNA library for small RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Selective encapsulation of single cells and subcellular organelles into picoliter- and femtoliter-volume droplets

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Stochastic gene expression in a single cell

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Regulation of noise in the expression of a single gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Thermostabilization and thermoactivation of thermolabile enzymes by trehalose and its application for the synthesis of full length cDNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

The metabolism of a poly(A) minus mRNA fraction in HeLa cells.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3583089

20 June 2018

Chemical and biological single cell analysis.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200093

21 January 2018

Biocompatible surfactants for water-in-fluorocarbon emulsions.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200093

21 January 2018

Chemical transfection of cells in picoliter aqueous droplets in fluorocarbon oil.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200093

21 January 2018

Advanced microfluidic droplet manipulation based on piezoelectric actuation

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200093

21 January 2018

Massively parallel single-molecule and single-cell emulsion reverse transcription polymerase chain reaction using agarose droplet microfluidics.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200093

21 January 2018

Controlled synthesis of cell-laden microgels by radical-free gelation in droplet microfluidics.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200093

21 January 2018

Agarose droplet microfluidics for highly parallel and efficient single molecule emulsion PCR.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200093

21 January 2018

Integrating whole transcriptome assays on a lab-on-a-chip for single cell gene profiling.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200093

21 January 2018

Microfluidic single-cell mRNA isolation and analysis

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200093

21 January 2018

High-throughput single copy DNA amplification and cell analysis in engineered nanoliter droplets

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200093

21 January 2018

Comparison of reverse transcriptases in gene expression analysis.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200093

21 January 2018

Controlling the retention of small molecules in emulsion microdroplets for use in cell-based assays

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200093

21 January 2018

Development and evaluation of a novel reverse transcription loop-mediated isothermal amplification (RT-LAMP) assay for detection of type II porcine reproductive and respiratory syndrome virus

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200093

21 January 2018

Electroactive microwell arrays for highly efficient single-cell trapping and analysis.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200093

21 January 2018

Microfluidic devices for the high-throughput chemical analysis of cells

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200093

21 January 2018

Electrically initiated upstream coalescence cascade of droplets in a microfluidic flow.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200093

21 January 2018

Pillar-induced droplet merging in microfluidic circuits.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200093

21 January 2018

Dropspots: a picoliter array in a microfluidic device.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200093

21 January 2018

An integrated device for monitoring time-dependent in vitro expression from single genes in picolitre droplets.

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200093

21 January 2018

Miniaturized total chemical analysis systems: A novel concept for chemical sensing

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200093

21 January 2018

“One Cell−One Well”: A New Approach to Inkjet Printing Single Cell Microarrays

1 reference

https://api.crossref.org/works/10.1002%2FBIES.201200093

21 January 2018

Catching bird flu in a droplet

1 reference

https://pubmed.ncbi.nlm.nih.gov/23281054

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Decompressing emulsion droplets favors coalescence

1 reference

https://pubmed.ncbi.nlm.nih.gov/23281054

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Breaking of an emulsion under an ac electric field

1 reference

https://pubmed.ncbi.nlm.nih.gov/23281054

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1002/BIES.201200093

1 reference

Europe PubMed Central

17 October 2017

1 reference

Europe PubMed Central

17 October 2017

1 reference

Europe PubMed Central

17 October 2017

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0 references

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