(Q30654221)

17 August 2017

NURD: an implementation of a new method to estimate isoform expression from non-uniform RNA-seq data (English)

1 reference

17 August 2017

1 reference

1 reference

Xinyun Ma

1

1 reference

PMCID

3717102

17 August 2017

Xuegong Zhang

series ordinal

2

1 reference

17 August 2017

10 July 2013

1 reference

17 August 2017

1 reference

17 August 2017

14

1 reference

17 August 2017

220

1 reference

Creative Commons Attribution 2.0 Generic

17 August 2017

start time

10 July 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2105-14-220

0 references

cites work

Streaming fragment assignment for real-time analysis of sequencing experiments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3717102

Modelling and simulating generic RNA-Seq experiments with the flux simulator

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3717102

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3717102

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3717102

RNA-Seq gene expression estimation with read mapping uncertainty

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3717102

TopHat: discovering splice junctions with RNA-Seq

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3717102

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3717102

Statistical inferences for isoform expression in RNA-Seq

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3717102

RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3717102

Mapping and quantifying mammalian transcriptomes by RNA-Seq

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3717102

Using non-uniform read distribution models to improve isoform expression inference in RNA-Seq.

20 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2105-14-220

21 January 2018

Identifiers

DOI

10.1186/1471-2105-14-220

1 reference

17 August 2017

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

17 August 2017

1 reference

PMCID

3717102