(Q30656825)

13 November 2017

Evaluating phylogenetic informativeness as a predictor of phylogenetic signal for metazoan, fungal, and mammalian phylogenomic data sets (English)

1 reference

13 November 2017

1 reference

1 reference

Jeffrey P Townsend

3

0 references

Andrew H. Moeller

series ordinal

2

object named as

Andrew H Moeller

1 reference

13 November 2017

Francesc López-Giráldez

series ordinal

1

1 reference

PMC publication ID

3708382

13 November 2017

language of work or name

English

0 references

publication date

26 June 2013

1 reference

BioMed Research International

13 November 2017

1 reference

13 November 2017

2013

1 reference

13 November 2017

621604

1 reference

Creative Commons Attribution 3.0 Unported

13 November 2017

start time

1 January 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

cites work

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Concatenated analysis sheds light on early metazoan evolution and fuels a modern "urmetazoon" hypothesis

28 July 2018

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FUNYBASE: a FUNgal phYlogenomic dataBASE

28 July 2018

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OrthoMaM: a database of orthologous genomic markers for placental mammal phylogenetics

28 July 2018

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Dating divergences in the Fungal Tree of Life: review and new analyses

28 July 2018

1 reference

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Paleontological evidence to date the tree of life

28 July 2018

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Approximate likelihood-ratio test for branches: A fast, accurate, and powerful alternative

28 July 2018

1 reference

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Evolutionary rates, divergence dates, and the performance of mitochondrial genes in Bayesian phylogenetic analysis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3708382

Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified

28 July 2018

1 reference

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Evolution of the genetic code in yeasts.

28 July 2018

1 reference

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Magic bullets and golden rules: data sampling in molecular phylogenetics

28 July 2018

1 reference

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ProtTest: selection of best-fit models of protein evolution

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3708382

MUSCLE: multiple sequence alignment with high accuracy and high throughput

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3708382

Parallel Metropolis coupled Markov chain Monte Carlo for Bayesian phylogenetic inference

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3708382

MrBayes 3: Bayesian phylogenetic inference under mixed models

28 July 2018

1 reference

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r8s: inferring absolute rates of molecular evolution and divergence times in the absence of a molecular clock

28 July 2018

1 reference

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Overcredibility of molecular phylogenies obtained by Bayesian phylogenetics

28 July 2018

1 reference

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The Bioperl toolkit: Perl modules for the life sciences

28 July 2018

1 reference

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Reconstructing/deconstructing the earliest eukaryotes: how comparative genomics can help

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3708382

Molecular phylogenetics and the origins of placental mammals

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3708382

Use of mitogenomic information in teleostean molecular phylogenetics: a tree-based exploration under the maximum-parsimony optimality criterion

28 July 2018

1 reference

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Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3708382

Likelihood-mapping: a simple method to visualize phylogenetic content of a sequence alignment

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3708382

Seq-Gen: an application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3708382

Phylogenetic performance of mitochondrial protein-coding genes in resolving relationships among vertebrates

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3708382

Efficiencies of different genes and different tree-building methods in recovering a known vertebrate phylogeny.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3708382

Phylogenomics and the reconstruction of the tree of life

28 July 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F621604

Is it better to add taxa or characters to a difficult phylogenetic problem?

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F621604

Profiling phylogenetic informativeness

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F621604

Phylogenetic informativeness profiling of 12 genes for 28 vertebrate taxa without divergence dates

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F621604

Phylogenetic information and experimental design in molecular systematics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F621604

Assessing the performance of single-copy genes for recovering robust phylogenies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F621604

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F621604

Phyutility: a phyloinformatics tool for trees, alignments and molecular data

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F621604

Treeness triangles: visualizing the loss of phylogenetic signal.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F621604

Cophenetic correlation analysis as a strategy to select phylogenetically informative proteins: an example from the fungal kingdom

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F621604

Testing congruence in phylogenomic analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F621604

Toward a more accurate time scale for the human mitochondrial DNA tree.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F621604

Mathematical elegance with biochemical realism: the covarion model of molecular evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F621604

On the best evolutionary rate for phylogenetic analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F621604

Genome-scale approaches to resolving incongruence in molecular phylogenies

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F621604

Site-Specific Evolutionary Rate Inference: Taking Phylogenetic Uncertainty into Account

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F621604

Can Incomplete Taxa Rescue Phylogenetic Analyses from Long-Branch Attraction?

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F621604

Comparing Bootstrap and Posterior Probability Values in the Four-Taxon Case

21 January 2018

1 reference

https://api.crossref.org/works/10.1155%2F2013%2F621604

Phylogenetic signal and noise: predicting the power of a data set to resolve phylogeny

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3708382

Comparing bootstrap and posterior probability values in the four-taxon case

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3708382

Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3708382

Animal evolution and the molecular signature of radiations compressed in time

25 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23878813

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1155/2013/621604

1 reference

13 November 2017

1 reference

PMC publication ID

3708382

13 November 2017

PubMed publication ID

23878813

1 reference

PMC publication ID

3708382