(Q30667041)

12 August 2017

Baleen whales host a unique gut microbiome with similarities to both carnivores and herbivores (English)

1 reference

12 August 2017

0 references

1 reference

1 reference

3

Joe Roman

1 reference

12 August 2017

6

James J McCarthy

1 reference

12 August 2017

Jon G Sanders

1

0 references

Peter R. Girguis

object named as

Peter R Girguis

7

0 references

author name string

Annabel C Beichman

2

1 reference

12 August 2017

Jarrod J Scott

4

1 reference

12 August 2017

David Emerson

5

1 reference

12 August 2017

language of work or name

English

0 references

publication date

22 September 2015

1 reference

12 August 2017

Nature Communications

1 reference

12 August 2017

6

1 reference

12 August 2017

8285

1 reference

Creative Commons Attribution 4.0 International

12 August 2017

start time

22 September 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

The bamboo-eating giant panda harbors a carnivore-like gut microbiota, with excessive seasonal variations

1 reference

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Glycan degradation (GlyDeR) analysis predicts mammalian gut microbiota abundance and host diet-specific adaptations

20 June 2018

1 reference

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The gut bacterial community of mammals from marine and terrestrial habitats

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

Diet rapidly and reproducibly alters the human gut microbiome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

Convergence of gut microbiomes in myrmecophagous mammals

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

UPARSE: highly accurate OTU sequences from microbial amplicon reads

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

Bacterial chitin degradation-mechanisms and ecophysiological strategies.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

Animals in a bacterial world, a new imperative for the life sciences

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

Methylotrophic methanogenic Thermoplasmata implicated in reduced methane emissions from bovine rumen.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

Diet and phylogeny shape the gut microbiota of Antarctic seals: a comparison of wild and captive animals

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

A phylogenetic blueprint for a modern whale

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

"Methanoplasmatales," Thermoplasmatales-related archaea in termite guts and other environments, are the seventh order of methanogens

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

Methanomassiliicoccus luminyensis gen. nov., sp. nov., a methanogenic archaeon isolated from human faeces

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

Complex carbohydrate utilization by the healthy human microbiome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

Metabolic reconstruction for metagenomic data and its application to the human microbiome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

The Pfam protein families database

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

Evidence of cellulose metabolism by the giant panda gut microbiome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

Target region selection is a critical determinant of community fingerprints generated by 16S pyrosequencing

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

Metagenomic biomarker discovery and explanation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

Diet drives convergence in gut microbiome functions across mammalian phylogeny and within humans

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

CDD: a Conserved Domain Database for the functional annotation of proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

The whale pump: marine mammals enhance primary productivity in a coastal basin

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

An insect herbivore microbiome with high plant biomass-degrading capacity

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

Search and clustering orders of magnitude faster than BLAST

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

QIIME allows analysis of high-throughput community sequencing data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

PyNAST: a flexible tool for aligning sequences to a template alignment

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

Spatial and temporal variations of the bacterial community in the bovine digestive tract

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

FastTree: computing large minimum evolution trees with profiles instead of a distance matrix

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

Cell surface enzyme attachment is mediated by family 37 carbohydrate-binding modules, unique to Ruminococcus albus

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

Worlds within worlds: evolution of the vertebrate gut microbiota

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

Evaluation of the bacterial diversity in the feces of cattle using 16S rDNA bacterial tag-encoded FLX amplicon pyrosequencing (bTEFAP).

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

Evolution of mammals and their gut microbes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

THE OCCURRENCE AND CHARACTERISTICS OF CHITINOCLASTIC BACTERIA IN THE SEA

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

A novel family of carbohydrate-binding modules identified with Ruminococcus albus proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

KEGG: kyoto encyclopedia of genes and genomes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

Baleen whales: preliminary evidence for forestomach microbial fermentation.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4595633

The abundance and variety of carbohydrate-active enzymes in the human gut microbiota

20 June 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS9285

Whales as marine ecosystem engineers

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS9285

Cutadapt removes adapter sequences from high-throughput sequencing reads

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS9285

FECAL METHANOGENS AND VERTEBRATE EVOLUTION.

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26393325

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Production rates of volatile fatty acids in the minke whale (Balaenoptera acutorostrata) forestomach

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26393325

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The microbiome of North Sea copepods

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS9285

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/NCOMMS9285

1 reference

Dimensions Publication ID

12 August 2017

0 references

0 references

1 reference

12 August 2017

PubMed publication ID

26393325

1 reference