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PhosFox: a bioinformatics tool for peptide-level processing of LC-MS/MS-based phosphoproteomic data
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stated in
Europe PubMed Central
PMC publication ID
4098950
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25028575%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 March 2020
title
PhosFox: a bioinformatics tool for peptide-level processing of LC-MS/MS-based phosphoproteomic data
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
4098950
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25028575%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 March 2020
main subject
bioinformatics
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author
Tero Aittokallio
series ordinal
4
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Europe PubMed Central
PMC publication ID
4098950
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25028575%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 March 2020
Tuula A. Nyman
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5
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Europe PubMed Central
PMC publication ID
4098950
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25028575%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 March 2020
Sandra Söderholm
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1
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Europe PubMed Central
PMC publication ID
4098950
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25028575%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 March 2020
Tiina Öhman
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3
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4098950
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25028575%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 March 2020
author name string
Petteri Hintsanen
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2
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Europe PubMed Central
PMC publication ID
4098950
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25028575%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 March 2020
publication date
26 June 2014
1 reference
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Europe PubMed Central
PMC publication ID
4098950
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25028575%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 March 2020
published in
Proteome Science
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Europe PubMed Central
PMC publication ID
4098950
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25028575%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 March 2020
volume
12
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4098950
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25028575%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 March 2020
page(s)
36
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4098950
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25028575%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 March 2020
describes a project that uses
Cytoscape
object named as
Cytoscape
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CZ Software Mentions: A large dataset of software mentions in the biomedical literature
exact match
https://scigraph.springernature.com/pub.10.1186/1477-5956-12-36
0 references
cites work
Label-free quantitative phosphoproteomic analysis reveals differentially regulated proteins and pathway in PRRSV-infected pulmonary alveolar macrophages
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PubMed Central
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An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database
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21 June 2018
Phosphoproteomic analyses reveal signaling pathways that facilitate lytic gammaherpesvirus replication
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21 June 2018
Quantitative phosphoproteomics reveals extensive cellular reprogramming during HIV-1 entry
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The N-terminal region of the DNA-dependent protein kinase catalytic subunit is required for its DNA double-stranded break-mediated activation
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The PRoteomics IDEntifications (PRIDE) database and associated tools: status in 2013
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Dynamics of the G protein-coupled vasopressin V2 receptor signaling network revealed by quantitative phosphoproteomics.
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21 June 2018
ProteoConnections: a bioinformatics platform to facilitate proteome and phosphoproteome analyses
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Quantitative subcellular proteome and secretome profiling of influenza A virus-infected human primary macrophages
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Andromeda: a peptide search engine integrated into the MaxQuant environment
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Reverse-phase phosphoproteome analysis of signaling pathways induced by Rift valley fever virus in human small airway epithelial cells
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Confident phosphorylation site localization using the Mascot Delta Score
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ArMone: a software suite specially designed for processing and analysis of phosphoproteome data.
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The phosphoproteomics data explosion.
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PubMed Central
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1 reference
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reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4098950
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25 November 2018
Identifiers
DOI
10.1186/1477-5956-12-36
1 reference
stated in
Europe PubMed Central
PMC publication ID
4098950
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25028575%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 March 2020
Dimensions Publication ID
1032691162
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PMC publication ID
4098950
1 reference
stated in
Europe PubMed Central
PMC publication ID
4098950
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25028575%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 March 2020
PubMed publication ID
25028575
1 reference
stated in
Europe PubMed Central
PMC publication ID
4098950
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25028575%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 March 2020
ResearchGate publication ID
263971760
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