(Q30855581)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28584094%20AND%20SRC:MED&resulttype=core&format=json

22 March 2020

title

Reconstructing blood stem cell regulatory network models from single-cell molecular profiles (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28584094%20AND%20SRC:MED&resulttype=core&format=json

22 March 2020

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28584094%20AND%20SRC:MED&resulttype=core&format=json

22 March 2020

Fiona K Hamey

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28584094%20AND%20SRC:MED&resulttype=core&format=json

22 March 2020

David Kent

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28584094%20AND%20SRC:MED&resulttype=core&format=json

22 March 2020

Nicola Wilson

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28584094%20AND%20SRC:MED&resulttype=core&format=json

22 March 2020

author name string

Sonia Nestorowa

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28584094%20AND%20SRC:MED&resulttype=core&format=json

22 March 2020

Sarah J Kinston

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28584094%20AND%20SRC:MED&resulttype=core&format=json

22 March 2020

language of work or name

English

0 references

publication date

1 June 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28584094%20AND%20SRC:MED&resulttype=core&format=json

Proceedings of the National Academy of Sciences of the United States of America

22 March 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28584094%20AND%20SRC:MED&resulttype=core&format=json

22 March 2020

volume

114

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28584094%20AND%20SRC:MED&resulttype=core&format=json

22 March 2020

issue

23

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28584094%20AND%20SRC:MED&resulttype=core&format=json

22 March 2020

page(s)

5822-5829

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28584094%20AND%20SRC:MED&resulttype=core&format=json

Resolving early mesoderm diversification through single-cell expression profiling

22 March 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

A single-cell resolution map of mouse hematopoietic stem and progenitor cell differentiation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Wishbone identifies bifurcating developmental trajectories from single-cell data

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

An experimentally validated network of nine haematopoietic transcription factors reveals mechanisms of cell state stability.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

destiny: diffusion maps for large-scale single-cell data in R.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Transcriptional Heterogeneity and Lineage Commitment in Myeloid Progenitors

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Processing, visualising and reconstructing network models from single-cell data.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Reconstructing gene regulatory dynamics from high-dimensional single-cell snapshot data

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Single-Cell Network Analysis Identifies DDIT3 as a Nodal Lineage Regulator in Hematopoiesis.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Combined Single-Cell Functional and Gene Expression Analysis Resolves Heterogeneity within Stem Cell Populations

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Decoding the regulatory network of early blood development from single-cell gene expression measurements.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Computational analysis of cell-to-cell heterogeneity in single-cell RNA-sequencing data reveals hidden subpopulations of cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Construction and validation of a regulatory network for pluripotency and self-renewal of mouse embryonic stem cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Single-cell trajectory detection uncovers progression and regulatory coordination in human B cell development

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Hard-wired heterogeneity in blood stem cells revealed using a dynamic regulatory network model

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Hematopoietic progenitor cell lines with myeloid and lymphoid potential

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Characterization of transcriptional networks in blood stem and progenitor cells using high-throughput single-cell gene expression analysis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Conditional Gata2 inactivation results in HSC loss and lymphatic mispatterning

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Building multifunctionality into a complex containing master regulators of hematopoiesis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Combinatorial transcriptional control in blood stem/progenitor cells: genome-wide analysis of ten major transcriptional regulators.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Modelling the Drosophila embryo

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Discovering hematopoietic mechanisms through genome-wide analysis of GATA factor chromatin occupancy

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Gene circuit analysis of the terminal gap gene huckebein

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Characterization of megakaryocyte GATA1-interacting proteins: the corepressor ETO2 and GATA1 interact to regulate terminal megakaryocyte maturation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Synchronous versus asynchronous modeling of gene regulatory networks

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Elucidation of the phenotypic, functional, and molecular topography of a myeloerythroid progenitor cell hierarchy.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Gata2, Fli1, and Scl form a recursively wired gene-regulatory circuit during early hematopoietic development

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Hematopoietic stem cells: the paradigmatic tissue-specific stem cell

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

ETO2 coordinates cellular proliferation and differentiation during erythropoiesis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

ETO-2 associates with SCL in erythroid cells and megakaryocytes and provides repressor functions in erythropoiesis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Geometric diffusions as a tool for harmonic analysis and structure definition of data: diffusion maps.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

An early haematopoietic defect in mice lacking the transcription factor GATA-2

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Transcription factor NF-E2 is required for platelet formation independent of the actions of thrombopoietin/MGDF in megakaryocyte development

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Megakaryocytic differentiation induced in 416B myeloid cells by GATA-2 and GATA-3 transgenes or 5-azacytidine is tightly coupled to GATA-1 expression

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Isolation and characterisation of a bipotential haematopoietic cell line

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Advancing haematopoietic stem and progenitor cell biology through single-cell profiling.

28 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1610609114

Single-cell transcriptional analysis to uncover regulatory circuits driving cell fate decisions in early mouse development

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1610609114

Understanding the adaptive growth strategy of Lactobacillus plantarum by in silico optimisation

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1610609114

Predictive computation of genomic logic processing functions in embryonic development

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1610609114

Diffusion maps for high-dimensional single-cell analysis of differentiation data.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1610609114

Defining an essential transcription factor program for naïve pluripotency

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1610609114

Transcriptional mechanisms of cell fate decisions revealed by single cell expression profiling

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1610609114

Purification of the human NF-E2 complex: cDNA cloning of the hematopoietic cell-specific subunit and evidence for an associated partner

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1610609114

Haploinsufficiency of GATA-2 perturbs adult hematopoietic stem-cell homeostasis

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1610609114

Transcription factor GATA-2 is required for proliferation/survival of early hematopoietic cells and mast cell formation, but not for erythroid and myeloid terminal differentiation.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

Lineage-restricted regulation of the murine SCL/TAL-1 promoter.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468644

25 November 2018

Identifiers

DOI

10.1073/PNAS.1610609114

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28584094%20AND%20SRC:MED&resulttype=core&format=json

22 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28584094%20AND%20SRC:MED&resulttype=core&format=json

22 March 2020

PubMed publication ID

28584094

1 reference