(Q30862360)

27 June 2017

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title

Sequence assembly using next generation sequencing data--challenges and solutions (English)

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27 June 2017

Francis Y L Chin

1

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27 June 2017

Henry C M Leung

series ordinal

2

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27 June 2017

S M Yiu

series ordinal

3

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27 June 2017

language of work or name

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17 October 2014

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Science in China. Series C: Life Sciences

27 June 2017

published in

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27 June 2017

volume

57

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27 June 2017

issue

11

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27 June 2017

page(s)

1140-1148

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describes a project that uses

27 June 2017

massive parallel sequencing

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based on heuristic

inferred from title

cites work

STRUCTURE OF A RIBONUCLEIC ACID

1 reference

https://api.crossref.org/works/10.1007%2FS11427-014-4752-9

Nucleotide Sequence of the Gene Coding for the Bacteriophage MS2 Coat Protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-014-4752-9

Complete nucleotide sequence of bacteriophage MS2 RNA: primary and secondary structure of the replicase gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-014-4752-9

Nucleotide sequence of bacteriophage φX174 DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-014-4752-9

Assembling millions of short DNA sequences using SSAKE.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-014-4752-9

Extending assembly of short DNA sequences to handle error.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-014-4752-9

SHARCGS, a fast and highly accurate short-read assembly algorithm for de novo genomic sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-014-4752-9

De novo bacterial genome sequencing: millions of very short reads assembled on a desktop computer

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-014-4752-9

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-014-4752-9

ABySS: a parallel assembler for short read sequence data

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-014-4752-9

Meta-IDBA: a de Novo assembler for metagenomic data

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-014-4752-9

IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-014-4752-9

IDBA-MT: de novo assembler for metatranscriptomic data generated from next-generation sequencing technology.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-014-4752-9

IDBA-tran: a more robust de novo de Bruijn graph assembler for transcriptomes with uneven expression levels

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-014-4752-9

De novo fragment assembly with short mate-paired reads: Does the read length matter?

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-014-4752-9

Short read fragment assembly of bacterial genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-014-4752-9

ALLPATHS: de novo assembly of whole-genome shotgun microreads

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-014-4752-9

Compact representation of k-mer de Bruijn graphs for genome read assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-014-4752-9

Quake: quality-aware detection and correction of sequencing errors

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-014-4752-9

De novo assembly of human genomes with massively parallel short read sequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS11427-014-4752-9

10.1007/S11427-014-4752-9

21 January 2018

Identifiers

DOI

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Dimensions Publication ID

27 June 2017

1049702250

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