(Q30884207)

27 June 2017

1 reference

title

Methods of integrating data to uncover genotype-phenotype interactions (English)

1 reference

27 June 2017

1 reference

Sarah A Pendergrass

4

0 references

Marylyn D. Ritchie

series ordinal

1

object named as

Marylyn D Ritchie

1 reference

27 June 2017

Emily R Holzinger

2

1 reference

27 June 2017

Ruowang Li

series ordinal

3

1 reference

27 June 2017

Dokyoon Kim

series ordinal

5

1 reference

27 June 2017

13 January 2015

1 reference

27 June 2017

Nature Reviews Genetics

1 reference

27 June 2017

16

1 reference

27 June 2017

2

1 reference

27 June 2017

85-97

1 reference

Sequencing technologies - the next generation

27 June 2017

1 reference

RNA sequencing: advances, challenges and opportunities

21 January 2018

1 reference

RNA-Seq: a revolutionary tool for transcriptomics

21 January 2018

1 reference

Principles and challenges of genomewide DNA methylation analysis

21 January 2018

1 reference

ChIP-seq: advantages and challenges of a maturing technology

21 January 2018

1 reference

Next-generation proteomics: towards an integrative view of proteome dynamics.

21 January 2018

1 reference

Metabolomics technology and bioinformatics

21 January 2018

1 reference

Single-cell sequencing-based technologies will revolutionize whole-organism science

21 January 2018

1 reference

Multipoint quantitative-trait linkage analysis in general pedigrees

21 January 2018

1 reference

The family based association test method: strategies for studying general genotype--phenotype associations.

21 January 2018

1 reference

Unbiased methods for population-based association studies

21 January 2018

1 reference

Integrated analysis of genetic, genomic and proteomic data

21 January 2018

1 reference

Data integration in genetics and genomics: methods and challenges

21 January 2018

1 reference

Moving toward a system genetics view of disease

21 January 2018

1 reference

Next-generation genomics: an integrative approach

21 January 2018

1 reference

Integrating heterogeneous high-throughput data for meta-dimensional pharmacogenomics and disease-related studies

21 January 2018

1 reference

The case for cloud computing in genome informatics

21 January 2018

1 reference

GobyWeb: simplified management and analysis of gene expression and DNA methylation sequencing data

21 January 2018

1 reference

Launching genomics into the cloud: deployment of Mercury, a next generation sequence analysis pipeline

21 January 2018

1 reference

Bionimbus: a cloud for managing, analyzing and sharing large genomics datasets

21 January 2018

1 reference

Pitfalls of merging GWAS data: lessons learned in the eMERGE network and quality control procedures to maintain high data quality

21 January 2018

1 reference

Quality control and quality assurance in genotypic data for genome-wide association studies

21 January 2018

1 reference

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

21 January 2018

1 reference

RNA-seq: from technology to biology

21 January 2018

1 reference

Next generation sequencing based approaches to epigenomics

21 January 2018

1 reference

Selective inference in complex research

21 January 2018

1 reference

Spatially uniform relieff (SURF) for computationally-efficient filtering of gene-gene interactions

21 January 2018

1 reference

21 January 2018

1 reference

Efficient multivariate linear mixed model algorithms for genome-wide association studies

21 January 2018

1 reference

Principal components analysis corrects for stratification in genome-wide association studies

21 January 2018

1 reference

Capturing heterogeneity in gene expression studies by surrogate variable analysis

21 January 2018

1 reference

Population-specific genetic variants important in susceptibility to cytarabine arabinoside cytotoxicity.

21 January 2018

1 reference

A genome-wide approach to identify genetic variants that contribute to etoposide-induced cytotoxicity.

21 January 2018

1 reference

Genetic variants associated with carboplatin-induced cytotoxicity in cell lines derived from Africans.

21 January 2018

1 reference

An integrative genomics approach to infer causal associations between gene expression and disease

21 January 2018

1 reference

Epigenome-wide association data implicate DNA methylation as an intermediary of genetic risk in rheumatoid arthritis

21 January 2018

1 reference

Quantitative measurement of allele-specific protein expression in a diploid yeast hybrid by LC-MS.

21 January 2018

1 reference

A computational workflow to identify allele-specific expression and epigenetic modification in maize

21 January 2018

1 reference

Transcriptome and genome sequencing uncovers functional variation in humans

21 January 2018

1 reference

Extensive variation in chromatin states across humans

21 January 2018

1 reference

Identification of genetic variants that affect histone modifications in human cells

21 January 2018

1 reference

The ENCODE (ENCyclopedia Of DNA Elements) Project

21 January 2018

1 reference

KEGG: kyoto encyclopedia of genes and genomes

21 January 2018

1 reference

Synergistic effect of different levels of genomic data for cancer clinical outcome prediction

21 January 2018

1 reference

A Bayesian integrative genomic model for pathway analysis of complex traits

21 January 2018

1 reference

Time to recurrence and survival in serous ovarian tumors predicted from integrated genomic profiles

21 January 2018

1 reference

ATHENA: the analysis tool for heritable and environmental network associations

21 January 2018

1 reference

ATHENA: Identifying interactions between different levels of genomic data associated with cancer clinical outcomes using grammatical evolution neural network

21 January 2018

1 reference

The properties of high-dimensional data spaces: implications for exploring gene and protein expression data.

21 January 2018

1 reference

A statistical framework for genomic data fusion

21 January 2018

1 reference

Protein function prediction via graph kernels.

21 January 2018

1 reference

Fast protein classification with multiple networks.

21 January 2018

1 reference

Graph sharpening plus graph integration: a synergy that improves protein functional classification

21 January 2018

1 reference

ATHENA: A knowledge-based hybrid backpropagation-grammatical evolution neural network algorithm for discovering epistasis among quantitative trait Loci

21 January 2018

1 reference

Predicting HIV drug resistance with neural networks

21 January 2018

1 reference

Ensemble classifier for protein fold pattern recognition.

21 January 2018

1 reference

An integrated approach to uncover drivers of cancer.

21 January 2018

1 reference

Stitching together multiple data dimensions reveals interacting metabolomic and transcriptomic networks that modulate cell regulation

21 January 2018

1 reference

Integrating large-scale functional genomic data to dissect the complexity of yeast regulatory networks

21 January 2018

1 reference

Integrative subtype discovery in glioblastoma using iCluster

21 January 2018

1 reference

21 January 2018

1 reference

Bayesian consensus clustering

21 January 2018

1 reference

Power and sample size calculations. A review and computer program

21 January 2018

1 reference

Replicating genotype-phenotype associations

21 January 2018

1 reference

Failure to replicate a genetic association may provide important clues about genetic architecture

21 January 2018

1 reference

Diverse convergent evidence in the genetic analysis of complex disease: coordinating omic, informatic, and experimental evidence to better identify and validate risk factors

21 January 2018

1 reference

Experimental validation of in silico predicted KCNA1, KCNA2, KCNA6 and KCNQ2 genes for association studies of peripheral nerve hyperexcitability syndrome in Jack Russell Terriers.

21 January 2018

1 reference

Computational prediction and experimental validation associating FABP-1 and pancreatic adenocarcinoma with diabetes

21 January 2018

1 reference

Identifying relationships among genomic disease regions: predicting genes at pathogenic SNP associations and rare deletions

21 January 2018

1 reference

Estrogens, enzyme variants, and breast cancer: a risk model.

21 January 2018

1 reference

An introduction to ROC analysis

21 January 2018

1 reference

A genome-wide association study identifies locus at 10q22 associated with clinical outcomes of adjuvant tamoxifen therapy for breast cancer patients in Japanese

21 January 2018

1 reference

Genome-wide association studies identify four ER negative-specific breast cancer risk loci

21 January 2018

1 reference

Large-scale genotyping identifies 41 new loci associated with breast cancer risk

21 January 2018

1 reference

Common genetic determinants of breast-cancer risk in East Asian women: a collaborative study of 23 637 breast cancer cases and 25 579 controls

21 January 2018

1 reference

PathAct: a novel method for pathway analysis using gene expression profiles

21 January 2018

1 reference

A two-stage random forest-based pathway analysis method

21 January 2018

1 reference

Matrix eQTL: ultra fast eQTL analysis via large matrix operations

21 January 2018

1 reference

A general test of association for quantitative traits in nuclear families

21 January 2018

1 reference

AlleleSeq: analysis of allele-specific expression and binding in a network framework

21 January 2018

1 reference

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data

21 January 2018

1 reference

HaploReg: a resource for exploring chromatin states, conservation, and regulatory motif alterations within sets of genetically linked variants

21 January 2018

1 reference

Annotation of functional variation in personal genomes using RegulomeDB

21 January 2018

1 reference

Genetics of gene expression and its effect on disease

21 January 2018

1 reference

Quality control procedures for genome-wide association studies

21 January 2018

1 reference

Statistical challenges of high-dimensional data

31 March 2020

1 reference

Tuning ReliefF for Genome-Wide Genetic Analysis

31 March 2020

1 reference

Sparse Principal Component Analysis

31 March 2020

1 reference

The nature of confounding in genome-wide association studies

31 March 2020

1 reference

Genome-wide mapping of allele-specific protein-DNA interactions in human cells.

31 March 2020

1 reference

31 March 2020

1 reference

Multicollinearity in Regression Analysis: The Problem Revisited

31 March 2020

1 reference

ATHENA: a tool for meta-dimensional analysis applied to genotypes and gene expression data to predict HDL cholesterol levels

31 March 2020

1 reference

12 December 2020

Biofilter: a knowledge-integration system for the multi-locus analysis of genome-wide association studies.

1 reference

12 December 2020

Glutathione S-transferase M1, M3, P1, and T1 genetic polymorphisms and susceptibility to breast cancer.

1 reference

12 December 2020

Association of cytochrome P450 1B1 (CYP1B1) polymorphism with steroid receptor status in breast cancer

1 reference

12 December 2020

Molecular epidemiology of breast cancer: genetic variation in steroid hormone metabolism

1 reference

12 December 2020

Identifiers

DOI

10.1038/NRG3868

1 reference

Dimensions Publication ID

27 June 2017

0 references

1 reference