(Q30924732)

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Formation of pseudo-terminal restriction fragments, a PCR-related bias affecting terminal restriction fragment length polymorphism analysis of microbial community structure

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scholarly article

1 reference

Europe PubMed Central

14 September 2017

Formation of pseudo-terminal restriction fragments, a PCR-related bias affecting terminal restriction fragment length polymorphism analysis of microbial community structure (English)

1 reference

Europe PubMed Central

14 September 2017

1 reference

based on heuristic

inferred from title

Michael W. Friedrich

object named as

Michael W Friedrich

2

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ORCID Public Data File 2021

author name string

Markus Egert

1

1 reference

Europe PubMed Central

14 September 2017

language of work or name

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publication date

1 May 2003

1 reference

Europe PubMed Central

14 September 2017

Applied and Environmental Microbiology

1 reference

Europe PubMed Central

14 September 2017

69

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Europe PubMed Central

14 September 2017

2555-2562

1 reference

Europe PubMed Central

14 September 2017

5

1 reference

Europe PubMed Central

14 September 2017

Analysis of mer Gene Subclasses within Bacterial Communities in Soils and Sediments Resolved by Fluorescent-PCR-Restriction Fragment Length Polymorphism Profiling.

1 reference

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Evaluation of PCR amplification bias by terminal restriction fragment length polymorphism analysis of small-subunit rRNA and mcrA genes by using defined template mixtures of methanogenic pure cultures and soil DNA extracts

1 reference

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1 reference

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21 June 2018

Terminal restriction fragment patterns: a tool for comparing microbial communities and assessing community dynamics

1 reference

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Bacterial community structure associated with a dimethylsulfoniopropionate-producing North Atlantic algal bloom

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Archaeal population dynamics during sequential reduction processes in rice field soil

1 reference

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Optimization of terminal-restriction fragment length polymorphism analysis for complex marine bacterioplankton communities and comparison with denaturing gradient gel electrophoresis

1 reference

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DGGE/TGGE a method for identifying genes from natural ecosystems.

1 reference

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Terminal restriction fragment length polymorphism (T-RFLP): an emerging method for characterizing diversity among homologous populations of amplification products.

1 reference

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A new approach to utilize PCR-single-strand-conformation polymorphism for 16S rRNA gene-based microbial community analysis.

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Kinetic bias in estimates of coastal picoplankton community structure obtained by measurements of small-subunit rRNA gene PCR amplicon length heterogeneity

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Bias in template-to-product ratios in multitemplate PCR

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A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics

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Determination of microbial diversity in environmental samples: pitfalls of PCR-based rRNA analysis

1 reference

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Betaine improves the PCR amplification of GC-rich DNA sequences

1 reference

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21 June 2018

Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=154551

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Nonradioactive method to study genetic profiles of natural bacterial communities by PCR-single-strand-conformation polymorphism.

1 reference

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Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR

1 reference

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Phylogenetic identification and in situ detection of individual microbial cells without cultivation

1 reference

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Collection of small subunit (16S- and 16S-like) ribosomal RNA structures: 1994

1 reference

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Type II restriction endonucleases cleave single-stranded DNAs in general

1 reference

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Isolation and direct complete nucleotide determination of entire genes. Characterization of a gene coding for 16S ribosomal RNA

1 reference

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Characterization of bacterial consortia capable of degrading 4-chlorobenzoate and 4-bromobenzoate under denitrifying conditions

1 reference

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25 November 2018

Molecular analyses of methyl-coenzyme M reductase alpha-subunit (mcrA) genes in rice field soil and enrichment cultures reveal the methanogenic phenotype of a novel archaeal lineage.

1 reference

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25 November 2018

An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics

1 reference

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1 reference

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12 December 2020

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Identifiers

10.1128/AEM.69.5.2555-2562.2003

1 reference

Europe PubMed Central

14 September 2017

1 reference

Europe PubMed Central

14 September 2017

1 reference

Europe PubMed Central

14 September 2017

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