(Q30989769)

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Two methods for proteomic analysis of formalin-fixed, paraffin embedded tissue result in differential protein identification, data quality, and cost

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scholarly article

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Europe PubMed Central

PubMed publication ID

28 June 2017

Two methods for proteomic analysis of formalin-fixed, paraffin embedded tissue result in differential protein identification, data quality, and cost (English)

1 reference

Europe PubMed Central

PubMed publication ID

28 June 2017

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author name string

Stephen A Luebker

1

1 reference

Europe PubMed Central

PubMed publication ID

28 June 2017

Melinda Wojtkiewicz

2

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Europe PubMed Central

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28 June 2017

Scott A Koepsell

3

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Europe PubMed Central

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28 June 2017

publication date

26 August 2015

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Europe PubMed Central

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28 June 2017

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Europe PubMed Central

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28 June 2017

15

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28 June 2017

21

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Europe PubMed Central

PubMed publication ID

28 June 2017

3744-3753

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Europe PubMed Central

PubMed publication ID

28 June 2017

Clinical proteomic applications of formalin-fixed paraffin-embedded tissues

1 reference

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Proteomic developments in the analysis of formalin-fixed tissue

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Advancing formaldehyde cross-linking towards quantitative proteomic applications

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Toward deciphering proteomes of formalin-fixed paraffin-embedded (FFPE) tissues.

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Analysis of the formalin-fixed paraffin-embedded tissue proteome: pitfalls, challenges, and future prospectives.

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Setting proteins free: progresses and achievements in proteomics of formalin-fixed, paraffin-embedded tissues.

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Proteome, phosphoproteome, and N-glycoproteome are quantitatively preserved in formalin-fixed paraffin-embedded tissue and analyzable by high-resolution mass spectrometry

1 reference

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Comparability of differential proteomics data generated from paired archival fresh-frozen and formalin-fixed samples by GeLC-MS/MS and spectral counting

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Phosphoproteome analysis of formalin-fixed and paraffin-embedded tissue sections mounted on microscope slides.

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Brain phosphoproteome obtained by a FASP-based method reveals plasma membrane protein topology.

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Antigen-epitope retrieval to facilitate proteomic analysis of formalin-fixed archival brain tissue

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Impact of pre-analytical factors on the proteomic analysis of formalin-fixed paraffin-embedded tissue

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Comparison between procedures using SDS for shotgun proteomic analyses of complex samples

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Comparison of two FFPE preparation methods using label-free shotgun proteomics: Application to tissues of diverticulitis patients

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A Proteomic Study of Human Merkel Cell Carcinoma

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Protein extraction from formalin-fixed, paraffin-embedded tissue sections: quality evaluation by mass spectrometry

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Complete solubilization of formalin-fixed, paraffin-embedded tissue may improve proteomic studies

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Critical comparison of sample preparation strategies for shotgun proteomic analysis of formalin-fixed, paraffin-embedded samples: insights from liver tissue.

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Efficient removal of detergents from proteins and peptides in a spin column format

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Top-down and bottom-up proteomics of SDS-containing solutions following mass-based separation

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Comprehensive tissue processing strategy for quantitative proteomics of formalin-fixed multiple sclerosis lesions

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Sample preparation and digestion for proteomic analyses using spin filters

1 reference

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Proteomic sample preparation from formalin fixed and paraffin embedded tissue

1 reference

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Site-specific proteomics approach for study protein S-nitrosylation

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Inhibition of protein carbamylation in urea solution using ammonium-containing buffers

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Repeatability and reproducibility in proteomic identifications by liquid chromatography-tandem mass spectrometry

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Clear cell melanoma: a cutaneous clear cell malignancy

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Formalin-fixed paraffin-embedded (FFPE) proteome analysis using gel-free and gel-based proteomics

1 reference

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Protein carbamylation: In vivo modification or in vitro artefact?

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Identifiers

10.1002/PMIC.201500147

1 reference

Europe PubMed Central

PubMed publication ID

28 June 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

28 June 2017

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