(Q31021948)

4 November 2017

Genetic Adaptation to Climate in White Spruce Involves Small to Moderate Allele Frequency Shifts in Functionally Diverse Genes (English)

1 reference

4 November 2017

1 reference

5

Jean Bousquet

1 reference

4 November 2017

4

Jean Beaulieu

1 reference

4 November 2017

Benjamin Hornoy

1

1 reference

4 November 2017

Nathalie Pavy

series ordinal

2

1 reference

4 November 2017

Sébastien Gérardi

series ordinal

3

1 reference

4 November 2017

11 November 2015

1 reference

Genome Biology and Evolution

4 November 2017

1 reference

4 November 2017

7

1 reference

4 November 2017

12

1 reference

4 November 2017

3269-3285

1 reference

Epigenetic regulation in plant responses to the environment

4 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Keeping it local: evidence for positive selection in Swedish Arabidopsis thaliana

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Phenotypic divergence of the common toad (Bufo bufo) along an altitudinal gradient: evidence for local adaptation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Cross-species outlier detection reveals different evolutionary pressures between sister species

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

The role of ubiquitin and the 26S proteasome in plant abiotic stress signaling

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Evolutionary and plastic responses to climate change in terrestrial plant populations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Genomic signature of adaptation to climate in Medicago truncatula.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Role of chromatin in water stress responses in plants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Activities at the Universal Protein Resource (UniProt)

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Data, information, knowledge and principle: back to metabolism in KEGG

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Genome sequencing and population genomics in non-model organisms

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Ecological genomics of local adaptation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

The CBL-CIPK network mediates different signaling pathways in plants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

The landscape of nucleotide polymorphism among 13,500 genes of the conifer picea glauca, relationships with functions, and comparison with medicago truncatula.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Antagonistic regulation of flowering time through distinct regulatory subunits of protein phosphatase 2A.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Key questions in the genetics and genomics of eco-evolutionary dynamics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

The genomic architecture and association genetics of adaptive characters using a candidate SNP approach in boreal black spruce.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Potential for evolutionary responses to climate change - evidence from tree populations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Epigenetic regulation of adaptive responses of forest tree species to the environment.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Development of high-density SNP genotyping arrays for white spruce (Picea glauca) and transferability to subtropical and nordic congeners

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Adaptive evolution: evaluating empirical support for theoretical predictions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

A spruce gene map infers ancient plant genome reshuffling and subsequent slow evolution in the gymnosperm lineage leading to extant conifers

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Predicting adaptive phenotypes from multilocus genotypes in Sitka spruce (Picea sitchensis) using random forest

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Transcriptome sequencing of Eucalyptus camaldulensis seedlings subjected to water stress reveals functional single nucleotide polymorphisms and genes under selection

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

SNP interaction detection with Random Forests in high-dimensional genetic data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Identification of gene modules associated with drought response in rice by network-based analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Disentangling the roles of history and local selection in shaping clinal variation of allele frequencies and gene expression in Norway spruce (Picea abies)

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Origin, fate, and architecture of ecologically relevant genetic variation.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

The genetic differentiation at quantitative trait loci under local adaptation.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Drought, salt, and temperature stress-induced metabolic rearrangements and regulatory networks.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Natural variation in Arabidopsis: from molecular genetics to ecological genomics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Integrated transcriptomic and proteomic profiling of white spruce stems during the transition from active growth to dormancy.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Adaptation to climate across the Arabidopsis thaliana genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Decoupling of differentiation between traits and their underlying genes in response to divergent selection.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

The heterogeneous levels of linkage disequilibrium in white spruce genes and comparative analysis with other conifers

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Evolutionary genetics of plant adaptation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

QTL mapping in white spruce: gene maps and genomic regions underlying adaptive traits across pedigrees, years and environments

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Association genetics of wood physical traits in the conifer white spruce and relationships with gene expression

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

The sucrose non-fermenting-1-related (SnRK) family of protein kinases: potential for manipulation to improve stress tolerance and increase yield.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Back to nature: ecological genomics of loblolly pine (Pinus taeda, Pinaceae).

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Molecular evolution of regulatory genes in spruces from different species and continents: heterogeneous patterns of linkage disequilibrium and selection but correlated recent demographic changes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Chromatin regulation functions in plant abiotic stress responses

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

A meta-analysis of local adaptation in plants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

The CBL-CIPK network in plant calcium signaling

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

The AtGenExpress global stress expression data set: protocols, evaluation and model data analysis of UV-B light, drought and cold stress responses.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Crosstalk between abiotic and biotic stress responses: a current view from the points of convergence in the stress signaling networks

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Gene selection and classification of microarray data using random forest.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

The Arabidopsis CDPK-SnRK superfamily of protein kinases.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

CIPK3, a calcium sensor-associated protein kinase that regulates abscisic acid and cold signal transduction in Arabidopsis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Transcriptome changes for Arabidopsis in response to salt, osmotic, and cold stress

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Transcription factors in plant defense and stress responses

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Monitoring the expression profiles of 7000 Arabidopsis genes under drought, cold and high-salinity stresses using a full-length cDNA microarray

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Biochemical and functional characterization of PKS11, a novel Arabidopsis protein kinase

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Constraint to adaptive evolution in response to global warming

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Reduced growth of Alaskan white spruce in the twentieth century from temperature-induced drought stress

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Inference of population structure using multilocus genotype data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

EMBOSS: the European Molecular Biology Open Software Suite

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

The Arabidopsis thaliana SOS2 gene encodes a protein kinase that is required for salt tolerance

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

A calcium sensor homolog required for plant salt tolerance

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Quantitative trait loci affecting differences in floral morphology between two species of monkeyflower (Mimulus)

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4700950

Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection

21 June 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV218

Trans-species shared polymorphisms at orthologous nuclear gene loci among distant species in the conifer Picea (Pinaceae): implications for the long-term maintenance of genetic diversity in trees

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV218

Detecting genotypic changes associated with selective mortality at sea in Atlantic salmon: polygenic multilocus analysis surpasses genome scan.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV218

Identifying Important Risk Factors for Survival in Kidney Graft Failure Patients Using Random Survival Forests

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV218

Transcriptional profiling reveals novel interactions between wounding, pathogen, abiotic stress, and hormonal responses in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV218

Bayesian identification of admixture events using multilocus molecular markers.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV218

Phylogeography of white spruce (Picea glauca) in eastern North America reveals contrasting ecological trajectories

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV218

Population genomics of Populus trichocarpa identifies signatures of selection and adaptive trait associations

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV218

A map of local adaptation in Arabidopsis thaliana.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV218

A calcium sensor and its interacting protein kinase are global regulators of abscisic acid signaling in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV218

Global monitoring of autumn gene expression within and among phenotypically divergent populations of Sitka spruce (Picea sitchensis).

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV218

Genome-wide association study dissects the genetic architecture of oil biosynthesis in maize kernels

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV218

Genetic structure and patterns of genetic variation among populations in eastern white spruce (Picea glauca)

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV218

Common factors drive adaptive genetic variation at different spatial scales in Arabis alpina

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV218

Genome-wide association implicates numerous genes underlying ecological trait variation in natural populations of Populus trichocarpa.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV218

Scanning the genome for gene single nucleotide polymorphisms involved in adaptive population differentiation in white spruce

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV218

Identification of conserved core xylem gene sets: conifer cDNA microarray development, transcript profiling and computational analyses.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV218

Parallel and lineage-specific molecular adaptation to climate in boreal black spruce

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV218

Activities at the Universal Protein Resource (UniProt)

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV218

Are adaptive loci transferable across genomes of related species? Outlier and environmental association analyses in Alpine Brassicaceae species

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV218

THE GENETIC ARCHITECTURE OF ADAPTATION UNDER MIGRATION-SELECTION BALANCE

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV218

Putting the landscape into the genomics of trees: approaches for understanding local adaptation and population responses to changing climate

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVV218

A Quantitative Survey of Local Adaptation and Fitness Trade‐Offs

21 January 2018

1 reference

12 December 2020

Contrasting evolutionary forces driving population structure at expressed sequence tag polymorphisms, allozymes and quantitative traits in white spruce

1 reference

12 December 2020

Scanning the genome for gene SNPs related to climate adaptation and estimating selection at the molecular level in boreal black spruce

1 reference

12 December 2020

A white spruce gene catalog for conifer genome analyses

1 reference

12 December 2020

Alteration of [beta]-Tubulin Gene Expression during Low-Temperature Exposure in Leaves of Arabidopsis thaliana

1 reference

12 December 2020

Molecular events of apical bud formation in white spruce, Picea glauca

1 reference

12 December 2020

Identifiers

DOI

10.1093/GBE/EVV218

1 reference

4 November 2017

1 reference

4 November 2017

PubMed publication ID

26560341

1 reference