(Q31034683)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995956%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

title

An experimentally-supported genome-scale metabolic network reconstruction for Yersinia pestis CO92 (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995956%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

0 references

1 reference

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995956%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

Joshua N Adkins

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995956%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

Pep Charusanti

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995956%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

Vladimir Motin

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995956%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

9

Bernhard O Palsson

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995956%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

author name string

Sadhana Chauhan

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995956%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

Kathleen McAteer

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995956%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

Daniel R Hyduke

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995956%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

Charles Ansong

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995956%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

publication date

13 October 2011

1 reference

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14 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995956%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

volume

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995956%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

page(s)

163

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995956%20AND%20SRC:MED&resulttype=core&format=json

A community effort towards a knowledge-base and mathematical model of the human pathogen Salmonella Typhimurium LT2

14 February 2020

cites work

1 reference

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Dioxygenases in Burkholderia ambifaria and Yersinia pestis that hydroxylate the outer Kdo unit of lipopolysaccharide

21 June 2018

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The Mycobacterium tuberculosis drugome and its polypharmacological implications

21 June 2018

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21 June 2018

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Insight into human alveolar macrophage and M. tuberculosis interactions via metabolic reconstructions

21 June 2018

1 reference

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Distinct clones of Yersinia pestis caused the black death

21 June 2018

1 reference

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The biomass objective function

21 June 2018

1 reference

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A protocol for generating a high-quality genome-scale metabolic reconstruction

21 June 2018

1 reference

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The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases

21 June 2018

1 reference

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Interpreting expression data with metabolic flux models: predicting Mycobacterium tuberculosis mycolic acid production

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

Genome-scale reconstruction of the metabolic network in Yersinia pestis, strain 91001.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

Attenuated enzootic (pestoides) isolates of Yersinia pestis express active aspartase

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

Reconstruction of biochemical networks in microorganisms

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

Cloning and functional expression of an alpha-galactosidase from Yersinia pestis biovar Microtus str. 91001.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

Human plague outbreak in two villages, Yunnan Province, China, 2005.

21 June 2018

1 reference

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A study of the nucleotide sequence variability of rha locus genes of Yersinia pestis main and non-main subspecies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic information

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

Inhibition of lysine biosynthesis: an evolving antibiotic strategy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

PATRIC: the VBI PathoSystems Resource Integration Center

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

Mutations Influencing the Assimilation of Nitrogen by Yersinia pestis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

Quick control of bubonic plague outbreak in Uttar Kashi, India

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

Influence of Na(+), dicarboxylic amino acids, and pH in modulating the low-calcium response of Yersinia pestis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

Enzyme genomics: Application of general enzymatic screens to discover new enzymes.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

Temperature-dependent variations and intraspecies diversity of the structure of the lipopolysaccharide of Yersinia pestis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

Complete Genome Sequence of Yersinia pestis Strain 91001, an Isolate Avirulent to Humans

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

Intraspecific diversity of Yersinia pestis.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

Varieties of Pasteurella pestis; new hypothesis

21 June 2018

1 reference

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Genetic variability of Yersinia pestis isolates as predicted by PCR-based IS100 genotyping and analysis of structural genes encoding glycerol-3-phosphate dehydrogenase (glpD)

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

Genome sequence of Yersinia pestis, the causative agent of plague

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

The failure of different strains of Yersinia pestis to produce lipopolysaccharide O-antigen under different growth conditions is due to mutations in the O-antigen gene cluster

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

High homogeneity of the Yersinia pestis fatty acid composition

21 June 2018

1 reference

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KEGG: kyoto encyclopedia of genes and genomes

21 June 2018

1 reference

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Yersinia pestis, the cause of plague, is a recently emerged clone of Yersinia pseudotuberculosis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

Flexible sequence similarity searching with the FASTA3 program package

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

Multidrug resistance in Yersinia pestis mediated by a transferable plasmid

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

A regulatory cascade in the induction of rhaBAD.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

Physiological basis of the low calcium response in Yersinia pestis.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

The relationships between growth temperature, fatty acid composition and the physical state and fluidity of membrane lipids in Yersinia enterocolitica

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

Identification of common molecular subsequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

Lipid composition of selected strains of Yersinia pestis and Yersinia pseudotuberculosis.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

The enoyl-[acyl-carrier-protein] reductase (FabI) of Escherichia coli, which catalyzes a key regulatory step in fatty acid biosynthesis, accepts NADH and NADPH as cofactors and is inhibited by palmitoyl-CoA.

21 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1752-0509-5-163

The Dual Biosynthetic Capability ofN-Acetylornithine Aminotransferase in Arginine and Lysine Biosynthesis†

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1752-0509-5-163

Physiological basis for rhamnose utilization by a mutant of Pasteurella pestis. II. A single mutational event leading to the production of two enzymes

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1752-0509-5-163

Enzyme genomics: Application of general enzymatic screens to discover new enzymes

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3220653

25 November 2018

Identifiers

DOI

10.1186/1752-0509-5-163

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995956%20AND%20SRC:MED&resulttype=core&format=json

journals/bmcsb/CharusantiCMLHMAAP11

14 February 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21995956%20AND%20SRC:MED&resulttype=core&format=json

14 February 2020

PubMed publication ID

21995956

1 reference