(Q31121939)

29 June 2017

title

A computational strategy to adjust for copy number in tumor Hi-C data (English)

1 reference

29 June 2017

2

Franziska Michor

1 reference

29 June 2017

Hua-Jun Wu

1

1 reference

29 June 2017

language of work or name

English

0 references

publication date

16 August 2016

1 reference

29 June 2017

1 reference

29 June 2017

volume

32

1 reference

29 June 2017

issue

24

1 reference

29 June 2017

page(s)

3695-3701

1 reference

Statistical confidence estimation for Hi-C data reveals regulatory chromatin contacts

29 June 2017

cites work

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

Analysis methods for studying the 3D architecture of the genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

Chromatin interaction analysis reveals changes in small chromosome and telomere clustering between epithelial and breast cancer cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

DNA replication timing and long-range DNA interactions predict mutational landscapes of cancer genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

Fast computation and applications of genome mappability

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

Chromatin architecture reorganization during stem cell differentiation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

Topological domains in mammalian genomes identified by analysis of chromatin interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

High order chromatin architecture shapes the landscape of chromosomal alterations in cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

Hallmarks of Cancer: The Next Generation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

HiCNorm: removing biases in Hi-C data via Poisson regression

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

Predicting chromatin organization using histone marks.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

Iterative correction of Hi-C data reveals hallmarks of chromosome organization

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

A high-resolution map of the three-dimensional chromatin interactome in human cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

Genome architectures revealed by tethered chromosome conformation capture and population-based modeling

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

High-resolution mapping of the spatial organization of a bacterial chromosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

Hi-Corrector: a fast, scalable and memory-efficient package for normalizing large-scale Hi-C data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

Comprehensive mapping of long-range interactions reveals folding principles of the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

DNA replication timing and higher-order nuclear organization determine single-nucleotide substitution patterns in cancer genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

Single-cell Hi-C reveals cell-to-cell variability in chromosome structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

Organization of the mitotic chromosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

Topologically associating domains are stable units of replication-timing regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

BEDTools: a flexible suite of utilities for comparing genomic features

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

Oncogene-mediated alterations in chromatin conformation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

HiFive: a tool suite for easy and efficient HiC and 5C data analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

HiTC: exploration of high-throughput 'C' experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

Combining a wavelet change point and the Bayes factor for analysing chromosomal interaction data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

Probabilistic modeling of Hi-C contact maps eliminates systematic biases to characterize global chromosomal architecture.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTW540

HiCUP: pipeline for mapping and processing Hi-C data

21 January 2018

1 reference

PubMed Central

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6078171

10.1093/BIOINFORMATICS/BTW540

25 November 2018

Identifiers

DOI

1 reference

journals/bioinformatics/WuM16

29 June 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

PMC publication ID

6078171

0 references

1 reference