(Q31147454)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24399359%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

title

De novo assembly and characterization of the transcriptome of the parasitic weed dodder identifies genes associated with plant parasitism (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24399359%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

0 references

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24399359%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

Yasunori Ichihashi

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24399359%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

author name string

Moran Farhi

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24399359%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

Kristina Zumstein

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24399359%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

Brad Townsley

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24399359%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

Rakefet David-Schwartz

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24399359%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

Neelima R Sinha

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24399359%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

language of work or name

English

0 references

publication date

7 January 2014

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24399359%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

number of pages

14

1 reference

inferred from page(s)

published in

Plant Physiology

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24399359%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

volume

166

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24399359%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

issue

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24399359%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

page(s)

1186-1199

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24399359%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

4 March 2020

copyright license

start time

25 January 2021

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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31 October 2018

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31 October 2018

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31 October 2018

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31 October 2018

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31 October 2018

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31 October 2018

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31 October 2018

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A High-Throughput Method for Illumina RNA-Seq Library Preparation

31 October 2018

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Plants that attack plants: molecular elucidation of plant parasitism

31 October 2018

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Interspecific RNA interference of SHOOT MERISTEMLESS-like disrupts Cuscuta pentagona plant parasitism.

31 October 2018

1 reference

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The iPlant Collaborative: Cyberinfrastructure for Plant Biology

31 October 2018

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Digital gene expression analysis based on integrated de novo transcriptome assembly of sweet potato [Ipomoea batatas (L.) Lam].

31 October 2018

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Cutoffs and k-mers: implications from a transcriptome study in allopolyploid plants

31 October 2018

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Fast gapped-read alignment with Bowtie 2

31 October 2018

1 reference

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Optimizing de novo transcriptome assembly from short-read RNA-Seq data: a comparative study

31 October 2018

1 reference

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Transcriptomes of the parasitic plant family Orobanchaceae reveal surprising conservation of chlorophyll synthesis

31 October 2018

1 reference

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RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

31 October 2018

1 reference

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Monophyly of the Convolvulaceae and circumscription of their major lineages based on DNA sequences of multiple chloroplast loci

31 October 2018

1 reference

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Structure and development of the upper haustorium in the parasitic flowering plant Cuscuta japonica (Convolvulaceae).

31 October 2018

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Full-length transcriptome assembly from RNA-Seq data without a reference genome

31 October 2018

1 reference

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RNA interference as a resistance mechanism against crop parasites in Africa: a 'Trojan horse' approach

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226353

Optimization of de novo transcriptome assembly from next-generation sequencing data

31 October 2018

1 reference

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Host plant resistance to parasitic weeds; recent progress and bottlenecks.

31 October 2018

1 reference

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A scaling normalization method for differential expression analysis of RNA-seq data

31 October 2018

1 reference

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The evolution of parasitism in plants

31 October 2018

1 reference

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Gene ontology analysis for RNA-seq: accounting for selection bias

31 October 2018

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31 October 2018

1 reference

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Parasitism by Cuscuta pentagona sequentially induces JA and SA defence pathways in tomato

31 October 2018

1 reference

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Interactions between auxin and strigolactone in shoot branching control

31 October 2018

1 reference

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The Sequence Alignment/Map format and SAMtools

31 October 2018

1 reference

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Gene silencing of mannose 6-phosphate reductase in the parasitic weed Orobanche aegyptiaca through the production of homologous dsRNA sequences in the host plant

31 October 2018

1 reference

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Fast and accurate short read alignment with Burrows-Wheeler transform

31 October 2018

1 reference

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Are herbicide-resistant crops the answer to controlling Cuscuta?

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226353

Strigolactone acts downstream of auxin to regulate bud outgrowth in pea and Arabidopsis

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226353

Engineering host resistance against parasitic weeds with RNA interference

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226353

RNA-Seq: a revolutionary tool for transcriptomics

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226353

Long-distance transport of mRNA via parenchyma cells and phloem across the host-parasite junction in Cuscuta

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226353

High-throughput functional annotation and data mining with the Blast2GO suite

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226353

Cross-species translocation of mRNA from host plants into the parasitic plant dodder.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226353

Progress in parasitic plant biology: host selection and nutrient transfer

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226353

Transfer of phloem-mobile substances from the host plants to the holoparasite Cuscuta sp.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226353

A novel form of resistance in rice to the angiosperm parasite Striga hermonthica.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226353

Pscroph, a parasitic plant EST database enriched for parasite associated transcripts

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226353

Localized hormone fluxes and early haustorium development in the hemiparasitic plant Triphysaria versicolor

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226353

Influence of the obligate parasite Cuscuta campestris on growth and biomass allocation of its host Mikania micrantha

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226353

Local, efflux-dependent auxin gradients as a common module for plant organ formation.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226353

Dodder hyphae invade the host: a structural and immunocytochemical characterization

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226353

Homologies in leaf form inferred from KNOXI gene expression during development

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226353

Macromolecular trafficking between Nicotiana tabacum and the holoparasite Cuscuta reflexa

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226353

Expansin message regulation in parasitic angiosperms: marking time in development

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226353

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4226353

Interaction of Gibberellic Acid and Indole-3-acetic Acid in the Growth of Excised Cuscuta Shoot Tips in Vitro

31 October 2018

1 reference

12 December 2020

Attachment of the parasitic weed dodder to the host

1 reference

12 December 2020

Parasitic plants major problem to food crops

1 reference

12 December 2020

Plastid genome structure and loss of photosynthetic ability in the parasitic genus Cuscuta

1 reference

12 December 2020

Identifiers

DOI

10.1104/PP.113.234864

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24399359%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24399359%20AND%20SRC:MED&resulttype=core&format=json