(Q32132473)

6 July 2017

title

Melting of the solvent structure around a RNA duplex: a molecular dynamics simulation study (English)

1 reference

molecular dynamics simulation

6 July 2017

main subject

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2

Eric Westhof

1 reference

6 July 2017

Pascal Auffinger

1

1 reference

ORCID Public Data File 2021

publication date

1 March 2002

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6 July 2017

published in

Biophysical Chemistry

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6 July 2017

volume

95

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6 July 2017

issue

3

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6 July 2017

page(s)

203-210

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RNA hydration: a detailed look

6 July 2017

cites work

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

Hydration of DNA in aqueous solution: NMR evidence for a kinetic destabilization of the minor groove hydration of d-(TTAA)2 versus d-(AATT)2 segments

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

Minor groove hydration of DNA in aqueous solution: sequence-dependent next neighbor effect of the hydration lifetimes in d(TTAA)2 segments measured by NMR spectroscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

Kinetics of DNA hydration

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

Water and monovalent ions in the minor groove of B-DNA oligonucleotides as seen by NMR.

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

Water molecules in DNA recognition I: hydration lifetimes of trp operator DNA in solution measured by NMR spectroscopy.

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

Determination of the residence time of water molecules hydrating B'- DNA and B-DNA, by one-dimensional zero-enhancement nuclear Overhauser effect spectroscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

Hydration of the RNA duplex r(CGCAAAUUUGCG)2 determined by NMR.

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

The orientation and dynamics of the C2'-OH and hydration of RNA and DNA.RNA hybrids

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

Water molecules in DNA recognition II: a molecular dynamics view of the structure and hydration of the trp operator

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

Water and ion binding around RNA and DNA (C,G) oligomers

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

Water and ion binding around r(UpA)12 and d(TpA)12 oligomers--comparison with RNA and DNA (CpG)12 duplexes.

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

Hydrophobic Groups Stabilize the Hydration Shell of 2'-O-Methylated RNA Duplexes

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

Win some, lose some: enthalpy-entropy compensation in weak intermolecular interactions

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

The missing term in effective pair potentials

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

Molecular dynamics simulations of biomolecules: long-range electrostatic effects

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

New tricks for modelers from the crystallography toolkit: the particle mesh Ewald algorithm and its use in nucleic acid simulations

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

Localization of ammonium ions in the minor groove of DNA duplexes in solution and the origin of DNA A-tract bending

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

Solvation of the left-handed hexamer d(5BrC-G-5BrC-G-5 BrC-G) in crystals grown at two temperatures

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

Thermodynamics of base pairing

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

Thermodynamics of nucleic acids and their interactions with ligands

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

Proton Exchange and Basepair Kinetics of Yeast tRNAPhe and tRNAASP1

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

NMR studies of Bacillus subtilis tRNA(Trp) hyperexpressed in Escherichia coli. Assignment of imino proton signals and determination of thermal stability

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

Physical studies of DNA premelting equilibria in duplexes with and without homo dA.dT tracts: correlations with DNA bending

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

Thermodynamics and premelting conformational changes of phased (dA)5 tracts.

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

X-ray fibre diffraction study of an elevated temperature structure of poly(dA).poly(dT).

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

The curvature of dA tracts is temperature dependent

1 reference

https://api.crossref.org/works/10.1016%2FS0301-4622%2801%2900257-5

7 January 2021

10.1016/S0301-4622(01)00257-5

Identifiers

DOI

1 reference

release_3esbubbfjbak7oqkm35je4y6qq

6 July 2017

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/3esbubbfjbak7oqkm35je4y6qq

24 November 2022

mapped directly with Wikidata item

1 reference