(Q33216449)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15935436%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

review article

1 reference

title

Molecular approaches to the assessment of biodiversity in aquatic microbial communities (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15935436%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

0 references

Jean-Francois Humbert

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15935436%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

author name string

Ursula Dorigo

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15935436%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

Laurence Volatier

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15935436%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

language of work or name

English

0 references

publication date

1 June 2005

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15935436%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15935436%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

volume

39

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15935436%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

issue

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15935436%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

page(s)

2207-2218

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15935436%20AND%20SRC:MED&resulttype=core&format=json

Telomere length measurements in leukocyte subsets by automated multicolor flow-FISH.

12 January 2020

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7 January 2021

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Terminal restriction fragment length polymorphism data analysis for quantitative comparison of microbial communities

7 January 2021

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New approaches to analyzing microbial biodiversity data

7 January 2021

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Factors influencing the detection of bacterial cells using fluorescence in situ hybridization (FISH): A quantitative review of published reports

7 January 2021

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Community structure of denitrifiers, bacteria, and archaea along redox gradients in Pacific Northwest marine sediments by terminal restriction fragment length polymorphism analysis of amplified nitrite reductase (nirS) and 16S rRNA genes

7 January 2021

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Identification of and spatio-temporal differences between microbial assemblages from two neighboring sulfurous lakes: comparison by microscopy and denaturing gradient gel electrophoresis.

7 January 2021

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Changes in archaeal, bacterial and eukaryal assemblages along a salinity gradient by comparison of genetic fingerprinting methods in a multipond solar saltern

7 January 2021

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The grammar of (micro)biological diversity

7 January 2021

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Consequences of changing biodiversity.

7 January 2021

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Estimating terrestrial biodiversity through extrapolation

7 January 2021

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INTERPOLATING, EXTRAPOLATING, AND COMPARING INCIDENCE-BASED SPECIES ACCUMULATION CURVES

7 January 2021

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Natural assemblages of marine proteobacteria and members of the Cytophaga-Flavobacter cluster consuming low- and high-molecular-weight dissolved organic matter

7 January 2021

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The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: development and evaluation of a more comprehensive probe set.

7 January 2021

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Monitoring gene expression in mixed microbial communities by using DNA microarrays

7 January 2021

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Study of genetic diversity of eukaryotic picoplankton in different oceanic regions by small-subunit rRNA gene cloning and sequencing

7 January 2021

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Interpreting 16S rDNA T-RFLP Data: Application of Self-Organizing Maps and Principal Component Analysis to Describe Community Dynamics and Convergence

7 January 2021

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Comparison of eukaryotic phytobenthic community composition in a polluted river by partial 18S rRNA gene cloning and sequencing.

7 January 2021

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Cyanophage diversity, inferred from g20 gene analyses, in the largest natural lake in France, Lake Bourget

7 January 2021

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Bacterial community dynamics during production of registered designation of origin Salers cheese as evaluated by 16S rRNA gene single-strand conformation polymorphism analysis

7 January 2021

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Formation of pseudo-terminal restriction fragments, a PCR-related bias affecting terminal restriction fragment length polymorphism analysis of microbial community structure

7 January 2021

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Composition of freshwater bacterial communities associated with cyanobacterial blooms in four Swedish lakes

7 January 2021

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Fidelity of select restriction endonucleases in determining microbial diversity by terminal-restriction fragment length polymorphism

7 January 2021

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The physical environment affects cyanophage communities in British Columbia inlets.

7 January 2021

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Statistical analysis of denaturing gel electrophoresis (DGE) fingerprinting patterns

7 January 2021

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https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

In situ accessibility of Escherichia coli 23S rRNA to fluorescently labeled oligonucleotide probes

7 January 2021

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Genetic diversity in Sargasso Sea bacterioplankton

7 January 2021

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DNA-based, culture-independent strategies for evaluating microbial communities in food-associated ecosystems

7 January 2021

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Comparative 16S rRNA analysis of lake bacterioplankton reveals globally distributed phylogenetic clusters including an abundant group of actinobacteria

7 January 2021

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Seasonal dynamics of phytoplankton and planktonic protozoan communities in a northern temperate humic lake: diversity in a dinoflagellate dominated system.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

How sensitive is PCR-SSCP?

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

Improvements in gel composition and electrophoretic conditions for broad-range mutation analysis by denaturing gradient gel electrophoresis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

Real time quantitative PCR

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

Richness and diversity of bacterioplankton species along an estuarine gradient in Moreton Bay, Australia

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

Counting the uncountable: statistical approaches to estimating microbial diversity

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

Molecular phylogenetic analyses of reverse-transcribed bacterial rRNA obtained from deep-sea cold seep sediments

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

Functional gene diversity analysis in BTEX contaminated soils by means of PCR-SSCP DNA fingerprinting: comparative diversity assessment against bacterial isolates and PCR-DNA clone libraries

7 January 2021

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Web-based phylogenetic assignment tool for analysis of terminal restriction fragment length polymorphism profiles of microbial communities

7 January 2021

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Microbial diversity and resistance to copper in metal-contaminated lake sediment.

7 January 2021

1 reference

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Application of Real-Time PCR for Quantification of Microcystin Genotypes in a Population of the Toxic Cyanobacterium Microcystis sp

7 January 2021

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Biodiversity and ecosystem functioning: a mechanistic model

7 January 2021

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Evaluation of PCR amplification bias by terminal restriction fragment length polymorphism analysis of small-subunit rRNA and mcrA genes by using defined template mixtures of methanogenic pure cultures and soil DNA extracts

7 January 2021

1 reference

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Bacterial diversity of epilithic biofilm assemblages of an anthropised river section, assessed by DGGE analysis of a 16S rDNA fragment

7 January 2021

1 reference

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Terminal restriction fragment length polymorphism (T-RFLP): an emerging method for characterizing diversity among homologous populations of amplification products.

7 January 2021

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Genetic diversity and temporal variation in the cyanophage community infecting marine Synechococcus species in Rhode Island's coastal waters

7 January 2021

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Interaction of nutrient limitation and protozoan grazing determines the phenotypic structure of a bacterial community

7 January 2021

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Oceanic 18S rDNA sequences from picoplankton reveal unsuspected eukaryotic diversity

7 January 2021

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Microbial biodiversity: approaches to experimental design and hypothesis testing in primary scientific literature from 1975 to 1999.

7 January 2021

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Fluorescence in situ hybridization (FISH) for direct visualization of microorganisms.

7 January 2021

1 reference

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DGGE/TGGE a method for identifying genes from natural ecosystems.

7 January 2021

1 reference

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Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

Determining Diversity of Freshwater Fungi on Decaying Leaves: Comparison of Traditional and Molecular Approaches

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

Evidence for anaerobic syntrophic acetate oxidation during methane production in the profundal sediment of subtropical Lake Kinneret (Israel).

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

Microbial ecology and evolution: a ribosomal RNA approach

7 January 2021

1 reference

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Rapid and sensitive detection of point mutations and DNA polymorphisms using the polymerase chain reaction

7 January 2021

1 reference

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An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

Characterization of microbial diversity in hypersaline environments by melting profiles and reassociation kinetics in combination with terminal restriction fragment length polymorphism (T-RFLP).

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

A molecular view of microbial diversity and the biosphere

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

Fluorescence in situ hybridization and catalyzed reporter deposition for the identification of marine bacteria

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

Comparison of fluorescently labeled oligonucleotide and polynucleotide probes for the detection of pelagic marine bacteria and archaea

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

Succession of microbial communities during hot composting as detected by PCR-single-strand-conformation polymorphism-based genetic profiles of small-subunit rRNA genes.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

Monitoring complex bacterial communities using culture-independent molecular techniques: application to soil environment

7 January 2021

1 reference

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Community Dynamics of Free-living and Particle-associated Bacterial Assemblages during a Freshwater Phytoplankton Bloom.

7 January 2021

1 reference

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Assessment of Changes in Biodiversity when a Community of Ultramicrobacteria Isolated from Groundwater Is Stimulated to Form a Biofilm

7 January 2021

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The species concept for prokaryotes

7 January 2021

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Microarrays: biotechnology's discovery platform for functional genomics.

7 January 2021

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Bacterial diversity in maize rhizospheres: conclusions on the use of genetic profiles based on PCR-amplified partial small subunit rRNA genes in ecological studies

7 January 2021

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Real-time quantitative PCR

7 January 2021

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Use of the polymerase chain reaction and denaturing gradient gel electrophoresis to study diversity in natural virus communities

7 January 2021

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Quantitative comparisons of 16S rRNA gene sequence libraries from environmental samples

7 January 2021

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Direct detection of 16S rRNA in soil extracts by using oligonucleotide microarrays

7 January 2021

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Molecular interactions on microarrays

7 January 2021

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Archaeal diversity in waters from deep South African gold mines

7 January 2021

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Oligonucleotide microarray for the study of functional gene diversity in the nitrogen cycle in the environment.

7 January 2021

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Microbial diversity and function in soil: from genes to ecosystems

7 January 2021

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Prokaryotic diversity--magnitude, dynamics, and controlling factors

7 January 2021

1 reference

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Quantitative real-time PCR for determination of microcystin synthetase e copy numbers for microcystis and anabaena in lakes.

7 January 2021

1 reference

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Evaluation of denaturing gradient gel electrophoresis in the detection of 16S rDNA sequence variation in rhizobia and methanotrophs

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

REVEALING GENETIC DIVERSITY OF EUKARYOTIC MICROORGANISMS IN AQUATIC ENVIRONMENTS BY DENATURING GRADIENT GEL ELECTROPHORESIS

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

Fingerprinting Microbial Assemblages from the Oxic/Anoxic Chemocline of the Black Sea

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

Fluorescence in situ hybridisation for the identification and characterisation of prokaryotes

7 January 2021

1 reference

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Optimizing fluorescent in situ hybridization with rRNA-targeted oligonucleotide probes for flow cytometric identification of microorganisms

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

The frequency of chimeric molecules as a consequence of PCR co-amplification of 16S rRNA genes from different bacterial species

7 January 2021

1 reference

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Real-time PCR quantification of rbcL (ribulose-1,5-bisphosphate carboxylase/oxygenase) mRNA in diatoms and pelagophytes

7 January 2021

1 reference

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Bacterial community dynamics during biostimulation and bioaugmentation experiments aiming at chlorobenzene degradation in groundwater

7 January 2021

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Improvement of fragment and primer selection for mutation detection by denaturing gradient gel electrophoresis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

Focused microarray analysis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

Biodiversity and ecosystem productivity in a fluctuating environment: the insurance hypothesis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

Geographic and environmental sources of variation in lake bacterial community composition

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

Applications of DNA microarrays in microbial systems

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

Nearly identical 16S rRNA sequences recovered from lakes in North America and Europe indicate the existence of clades of globally distributed freshwater bacteria

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

Typical freshwater bacteria: an analysis of available 16S rRNA gene sequences from plankton of lakes and rivers

7 January 2021

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Molecular microbial diversity in soils from eastern Amazonia: evidence for unusual microorganisms and microbial population shifts associated with deforestation

7 January 2021

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7 January 2021

Analysis of mer Gene Subclasses within Bacterial Communities in Soils and Sediments Resolved by Fluorescent-PCR-Restriction Fragment Length Polymorphism Profiling.

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

7 January 2021

Effect of phenylurea herbicides on soil microbial communities estimated by analysis of 16S rRNA gene fingerprints and community-level physiological profiles

1 reference

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7 January 2021

Automated approach for ribosomal intergenic spacer analysis of microbial diversity and its application to freshwater bacterial communities.

1 reference

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7 January 2021

Phylogenetic diversity of subsurface marine microbial communities from the Atlantic and Pacific Oceans

1 reference

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7 January 2021

Polynucleotide probes that target a hypervariable region of 16S rRNA genes to identify bacterial isolates corresponding to bands of community fingerprints.

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

7 January 2021

Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA.

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

7 January 2021

Optimization of terminal-restriction fragment length polymorphism analysis for complex marine bacterioplankton communities and comparison with denaturing gradient gel electrophoresis

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

7 January 2021

Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

7 January 2021

Quantifying microbial diversity: morphotypes, 16S rRNA genes, and carotenoids of oxygenic phototrophs in microbial mats

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

7 January 2021

Increase in Fluorescence Intensity of 16S rRNA In Situ Hybridization in Natural Samples Treated with Chloramphenicol.

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

7 January 2021

Distribution of bacterioplankton in meromictic Lake Saelenvannet, as determined by denaturing gradient gel electrophoresis of PCR-amplified gene fragments coding for 16S rRNA

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

7 January 2021

Microbial community changes in a perturbed agricultural soil investigated by molecular and physiological approaches

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

7 January 2021

A new approach to utilize PCR-single-strand-conformation polymorphism for 16S rRNA gene-based microbial community analysis.

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

7 January 2021

Molecular analysis of microbial community structures in pristine and contaminated aquifers: field and laboratory microcosm experiments

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

7 January 2021

Fluorescent in situ hybridization with rRNA-targeted oligonucleotide probes to identify small phytoplankton by flow cytometry

1 reference

https://api.crossref.org/works/10.1016%2FJ.WATRES.2005.04.007

7 January 2021

10.1016/J.WATRES.2005.04.007

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15935436%20AND%20SRC:MED&resulttype=core&format=json

release_qnjdxng4f5ewji3uvq6bf7drbi

12 January 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/qnjdxng4f5ewji3uvq6bf7drbi

24 November 2022

mapped directly with Wikidata item

1 reference