(Q33263366)

24 July 2017

title

The complex of ethidium bromide with genomic DNA: structure analysis by polarized Raman spectroscopy (English)

1 reference

24 July 2017

2

James M Benevides

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24 July 2017

1

Masamichi Tsuboi

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24 July 2017

3

George J Thomas

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24 July 2017

language of work or name

English

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publication date

10 November 2006

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24 July 2017

number of pages

7

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inferred from page(s)

published in

Biophysical Journal

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24 July 2017

volume

92

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24 July 2017

issue

3

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24 July 2017

page(s)

928-934

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Local conformational changes induced in B-DNA by ethidium intercalation

24 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1779987

Thermodynamics of drug-DNA interactions

21 June 2018

1 reference

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Protein and drug interactions in the minor groove of DNA.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1779987

Analysis and interpretation of ligand-DNA binding isotherms

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1779987

Sequence specific recognition of ligand-DNA complexes studied by NMR.

21 June 2018

1 reference

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Structural basis of polyamine-DNA recognition: spermidine and spermine interactions with genomic B-DNAs of different GC content probed by Raman spectroscopy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1779987

Drug-DNA recognition: energetics and implications for design

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1779987

Energetics of DNA intercalation reactions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1779987

A-form conformational motifs in ligand-bound DNA structures

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1779987

Protein-directed DNA structure II. Raman spectroscopy of a leucine zipper bZIP complex.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1779987

Protein-directed DNA structure. I. Raman spectroscopy of a high-mobility-group box with application to human sex reversal

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1779987

Dependence of the Raman signature of genomic B-DNA on nucleotide base sequence

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1779987

DNA melting investigated by differential scanning calorimetry and Raman spectroscopy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1779987

Polarized Raman spectra of oriented fibers of A DNA and B DNA: anisotropic and isotropic local Raman tensors of base and backbone vibrations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1779987

Binding of ethidium derivatives to natural DNA: a 300 MHz 1H NMR study

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1779987

Visualization of drug-nucleic acid interactions at atomic resolution. IX. Structures of two N,N-dimethylproflavine: 5-iodocytidylyl (3'-5') guanosine crystalline complexes

21 June 2018

1 reference

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The nucleic acid database. A comprehensive relational database of three-dimensional structures of nucleic acids

21 June 2018

1 reference

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Visualization of drug-nucleic acid interactions at atomic resolution. III. Unifying structural concepts in understanding drug-DNA interactions and their broader implications in understanding protein-DNA interactions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1779987

HU protein employs similar mechanisms of minor-groove recognition in binding to different B-DNA sites: demonstration by Raman spectroscopy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1779987

DNA secondary structure and Raman markers of supercoiling in Escherichia coli plasmid pUC19.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1779987

Sequence and structural selectivity of nucleic acid binding ligands

31 October 2018

1 reference

12 December 2020

Molecular mechanical calculations on the interaction of ethidium cation with double-helical DNA

1 reference

12 December 2020

Visualization of drug-nucleic acid interactions at atomic resolution. VII. Structure of an ethidium/dinucleoside monophosphate crystalline complex, ethidium: uridylyl(3'-5') adenosine

1 reference

12 December 2020

Visualization of drug-nucleic acid interactions at atomic resolution. VIII. Structures of two ethidium/dinucleoside monophosphate crystalline complexes containing ethidium: cytidylyl(3'-5') guanosine

1 reference

12 December 2020

Visualization of drug-nucleic acid interactions at atomic resolution. X. Structure of a N,N-dimethylproflavine: deoxycytidylyl(3'-5')deoxyguanosine crystalline complex

1 reference

12 December 2020

Structural analysis of nucleic acid aptamers

1 reference

12 December 2020

10.1529/BIOPHYSJ.106.093633

Identifiers

DOI

1 reference

24 July 2017

1 reference

24 July 2017

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