(Q33280749)

English

Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments (English)

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

1 reference

based on heuristic

inferred from title

object named as

Cindy J Smith

1

0 references

David B. Nedwell

2

object named as

David B Nedwell

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

author name string

Liang F Dong

3

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

A Mark Osborn

4

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

language of work or name

0 references

publication date

30 March 2007

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Applied and Environmental Microbiology

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

73

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

11

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

3612-3622

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Structure and activity of the nitrate-reducing community in the rhizosphere of Lolium perenne and Trifolium repens under long-term elevated atmospheric pCO.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932689

21 June 2018

Detection and widespread distribution of the nrfA gene encoding nitrite reduction to ammonia, a short circuit in the biological nitrogen cycle that competes with denitrification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932689

21 June 2018

Analysis of nitrite reductase (nirK and nirS) genes and cultivation reveal depauperate community of denitrifying bacteria in the Black Sea suboxic zone

1 reference

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21 June 2018

Microbial succession of nitrate-reducing bacteria in the rhizosphere of Poa alpina across a glacier foreland in the Central Alps.

1 reference

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21 June 2018

Structure and activity of the denitrifying community in a maize-cropped field fertilized with composted pig manure or ammonium nitrate.

1 reference

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21 June 2018

Activity and composition of the denitrifying bacterial community respond differently to long-term fertilization

1 reference

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21 June 2018

Complete Genome Sequence of the Facultative Anaerobic Magnetotactic Bacterium Magnetospirillum sp. strain AMB-1

1 reference

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21 June 2018

Nickel mine spoils revegetation attempts: effect of pioneer plants on two functional bacterial communities involved in the N-cycle

1 reference

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21 June 2018

Diversity of transcripts of nitrite reductase genes (nirK and nirS) in rhizospheres of grain legumes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932689

21 June 2018

Biphasic behavior of anammox regulated by nitrite and nitrate in an estuarine sediment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932689

21 June 2018

Molecular, biochemical, and physiological approaches for understanding the ecology of denitrification

1 reference

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21 June 2018

Establishment of a real-time PCR-based approach for accurate quantification of bacterial RNA targets in water, using Salmonella as a model organism

1 reference

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21 June 2018

Influence of maize mucilage on the diversity and activity of the denitrifying community.

1 reference

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21 June 2018

Phylogenetic taxonomy of the family Chlorobiaceae on the basis of 16S rRNA and fmo (Fenna-Matthews-Olson protein) gene sequences

1 reference

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The complete genome sequence of the carcinogenic bacterium Helicobacter hepaticus

1 reference

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21 June 2018

Rhodoferax ferrireducens sp. nov., a psychrotolerant, facultatively anaerobic bacterium that oxidizes acetate with the reduction of Fe(III).

1 reference

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21 June 2018

Molecular diversity of denitrifying genes in continental margin sediments within the oxygen-deficient zone off the Pacific coast of Mexico

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932689

21 June 2018

Nitric oxide reductase (norB) genes from pure cultures and environmental samples

1 reference

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21 June 2018

Genetic characterization of the nitrate reducing community based on narG nucleotide sequence analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932689

21 June 2018

Anaerobic ammonium oxidation by anammox bacteria in the Black Sea.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932689

21 June 2018

Oligonucleotide microarray for the study of functional gene diversity in the nitrogen cycle in the environment.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932689

21 June 2018

Molecular analysis of the nitrate-reducing community from unplanted and maize-planted soils

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932689

21 June 2018

Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932689

21 June 2018

Real-time PCR quantification of rbcL (ribulose-1,5-bisphosphate carboxylase/oxygenase) mRNA in diatoms and pelagophytes

1 reference

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21 June 2018

Nitrous oxide formation in the Colne estuary, England: the central role of nitrite

1 reference

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21 June 2018

Simultaneous extraction from bacterioplankton of total RNA and DNA suitable for quantitative structure and function analyses.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932689

21 June 2018

Characterization and description of Anaeromyxobacter dehalogenans gen. nov., sp. nov., an aryl-halorespiring facultative anaerobic myxobacterium

1 reference

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21 June 2018

Application of the 5' fluorogenic exonuclease assay (TaqMan) for quantitative ribosomal DNA and rRNA analysis in sediments

1 reference

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21 June 2018

Community structure of denitrifiers, bacteria, and archaea along redox gradients in Pacific Northwest marine sediments by terminal restriction fragment length polymorphism analysis of amplified nitrite reductase (nirS) and 16S rRNA genes

1 reference

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Pseudomonas stutzeri nitrite reductase gene abundance in environmental samples measured by real-time PCR

1 reference

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PCR bias in ecological analysis: a case study for quantitative Taq nuclease assays in analyses of microbial communities

1 reference

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21 June 2018

Quantitative analysis of small-subunit rRNA genes in mixed microbial populations via 5'-nuclease assays

1 reference

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21 June 2018

Nitrite reductase genes (nirK and nirS) as functional markers to investigate diversity of denitrifying bacteria in pacific northwest marine sediment communities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932689

21 June 2018

Horizontal heterogeneity of denitrifying bacterial communities in marine sediments by terminal restriction fragment length polymorphism analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932689

21 June 2018

Messenger RNA stability and its role in control of gene expression in bacteria and phages

1 reference

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21 June 2018

Detection of genes for periplasmic nitrate reductase in nitrate respiring bacteria and in community DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932689

21 June 2018

Development of PCR primer systems for amplification of nitrite reductase genes (nirK and nirS) to detect denitrifying bacteria in environmental samples

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932689

21 June 2018

Anaerobic growth, a property horizontally transferred by an Hfr-like mechanism among extreme thermophiles.

1 reference

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21 June 2018

Cell biology and molecular basis of denitrification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932689

21 June 2018

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

1 reference

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21 June 2018

Shewanella gelidimarina sp. nov. and Shewanella frigidimarina sp. nov., novel Antarctic species with the ability to produce eicosapentaenoic acid (20:5 omega 3) and grow anaerobically by dissimilatory Fe(III) reduction.

1 reference

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21 June 2018

Geobacter metallireducens gen. nov. sp. nov., a microorganism capable of coupling the complete oxidation of organic compounds to the reduction of iron and other metals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932689

21 June 2018

Soil and sediment bacteria capable of aerobic nitrate respiration.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932689

21 June 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932689

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Basic local alignment search tool

1 reference

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Numerically dominant denitrifying bacteria from world soils

1 reference

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21 June 2018

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1 reference

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31 October 2018

Quantitative detection of the nosZ gene, encoding nitrous oxide reductase, and comparison of the abundances of 16S rRNA, narG, nirK, and nosZ genes in soils.

1 reference

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31 October 2018

Evaluation of quantitative polymerase chain reaction-based approaches for determining gene copy and gene transcript numbers in environmental samples.

1 reference

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31 October 2018

Communities of nirS-type denitrifiers in the water column of the oxygen minimum zone in the eastern South Pacific.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932689

31 October 2018

Quantification of denitrifying bacteria in soils by nirK gene targeted real-time PCR.

1 reference

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31 October 2018

Quantification of dissimilatory (bi)sulphite reductase gene expression in Desulfobacterium autotrophicum using real-time RT-PCR.

1 reference

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31 October 2018

N2 production by the anammox reaction in the anoxic water column of Golfo Dulce, Costa Rica.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932689

31 October 2018

Characterization of a nitrate-respiring bacterial community using the nitrate reductase gene (narG) as a functional marker

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1932689

31 October 2018

Synchronized expression of ftsZ in natural Prochlorococcus populations of the Red Sea.

1 reference

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31 October 2018

Effects of management regime and plant species on the enzyme activity and genetic structure of N-fixing, denitrifying and nitrifying bacterial communities in grassland soils

1 reference

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31 October 2018

The Use of Transformations

1 reference

https://pubmed.ncbi.nlm.nih.gov/17400770

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Quantification of a novel group of nitrate-reducing bacteria in the environment by real-time PCR

1 reference

https://pubmed.ncbi.nlm.nih.gov/17400770

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/AEM.02894-06

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

ResearchGate publication ID

0 references

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