(Q33316034)

English

Genomewide expression analysis in zebrafish mind bomb alleles with pancreas defects of different severity identifies putative Notch responsive genes

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scholarly article

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Europe PubMed Central

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25 July 2017

Genomewide expression analysis in zebrafish mind bomb alleles with pancreas defects of different severity identifies putative Notch responsive genes (English)

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25 July 2017

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Joshy George

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Ashok Hegde

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25 July 2017

Nick Chuanxin Qiu

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25 July 2017

Xuehui Qiu

3

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25 July 2017

Steven Hao-Kee Ho

4

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25 July 2017

Kenny Qi-Ye Tay

5

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25 July 2017

Felicia Soo Lee Ng

7

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25 July 2017

Kunde Ramamoorthy Govindarajan

8

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25 July 2017

Zhiyuan Gong

9

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25 July 2017

Sinnakaruppan Mathavan

10

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25 July 2017

Yun-Jin Jiang

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23 January 2008

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25 July 2017

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25 July 2017

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25 July 2017

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25 July 2017

e1479

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25 July 2017

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23 January 2008

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Novel transcript nort is a downstream target gene of the Notch signaling pathway in zebrafish

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21 June 2018

Distinct delta and jagged genes control sequential segregation of pancreatic cell types from precursor pools in zebrafish.

1 reference

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21 June 2018

Genomewide expression profiling in the zebrafish embryo identifies target genes regulated by Hedgehog signaling during vertebrate development

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21 June 2018

Snx5, as a Mind bomb-binding protein, is expressed in hematopoietic and endothelial precursor cells in zebrafish

1 reference

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21 June 2018

NOTCH2 mutations cause Alagille syndrome, a heterogeneous disorder of the notch signaling pathway

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Large scale real-time PCR validation on gene expression measurements from two commercial long-oligonucleotide microarrays

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Analyses of pancreas development by generation of gfp transgenic zebrafish using an exocrine pancreas-specific elastaseA gene promoter

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21 June 2018

The E3 ubiquitin ligase itch couples JNK activation to TNFalpha-induced cell death by inducing c-FLIP(L) turnover

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21 June 2018

Wnt5 signaling in vertebrate pancreas development

1 reference

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21 June 2018

Transcriptome analysis of zebrafish embryogenesis using microarrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

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Off limits--integrins holding boundaries in somitogenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Analysis of the Zebrafish perplexed mutation reveals tissue-specific roles for de novo pyrimidine synthesis during development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Minireview: transcriptional regulation in pancreatic development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Sequence and embryonic expression of three zebrafish fringe genes: lunatic fringe, radical fringe, and manic fringe

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

her3, a zebrafish member of the hairy-E(spl) family, is repressed by Notch signalling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Gene regulatory factors in pancreatic development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

A Notch feeling of somite segmentation and beyond

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

The segmentation clock: converting embryonic time into spatial pattern

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Mind bomb is a ubiquitin ligase that is essential for efficient activation of Notch signaling by Delta

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

A segmental nearest neighbor normalization and gene identification method gives superior results for DNA-array analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Oscillatory expression of the bHLH factor Hes1 regulated by a negative feedback loop

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

A death-associated protein kinase (DAPK)-interacting protein, DIP-1, is an E3 ubiquitin ligase that promotes tumor necrosis factor-induced apoptosis and regulates the cellular levels of DAPK

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Identification of beta-cell-specific insulin gene transcription factor RIPE3b1 as mammalian MafA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Direct evidence for the pancreatic lineage: NGN3+ cells are islet progenitors and are distinct from duct progenitors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Protein degradation: four E3s for the notch pathway

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

A novel Notch ligand, Dll4, induces T-cell leukemia/lymphoma when overexpressed in mice by retroviral-mediated gene transfer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Notch and presenilin: a proteolytic mechanism emerges

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Significance analysis of microarrays applied to the ionizing radiation response

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Hes7: a bHLH-type repressor gene regulated by Notch and expressed in the presomitic mesoderm

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Notch signaling: from the outside in

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

A common enzyme connects notch signaling and Alzheimer's disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Recognition and ubiquitination of Notch by Itch, a hect-type E3 ubiquitin ligase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Control of her1 expression during zebrafish somitogenesis by a delta-dependent oscillator and an independent wave-front activity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

A novel proteolytic cleavage involved in Notch signaling: the role of the disintegrin-metalloprotease TACE

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Independent development of pancreatic alpha- and beta-cells from neurogenin3-expressing precursors: a role for the notch pathway in repression of premature differentiation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Mutations in the human delta homologue, DLL3, cause axial skeletal defects in spondylocostal dysostosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

neurogenin3 is required for the development of the four endocrine cell lineages of the pancreas

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Gefiltin in zebrafish embryos: sequential gene expression of two neurofilament proteins in retinal ganglion cells.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Control of endodermal endocrine development by Hes-1

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Notch signalling controls pancreatic cell differentiation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

DNA arrays for analysis of gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Notch signaling: cell fate control and signal integration in development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Hes1 and Hes5 as notch effectors in mammalian neuronal differentiation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Ligand-induced cleavage and regulation of nuclear entry of Notch in Drosophila melanogaster embryos

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Cluster analysis and display of genome-wide expression patterns

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Indirect evidence for Delta-dependent intracellular processing of notch in Drosophila embryos

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Nuclear access and action of notch in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Alagille syndrome is caused by mutations in human Jagged1, which encodes a ligand for Notch1

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Mutations in the human Jagged1 gene are responsible for Alagille syndrome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Ontogeny of glutamic acid decarboxylase gene expression in the mouse pancreas.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Mutations affecting neurogenesis and brain morphology in the zebrafish, Danio rerio.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Mutations affecting somite formation and patterning in the zebrafish, Danio rerio.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Notch3 mutations in CADASIL, a hereditary adult-onset condition causing stroke and dementia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

ICA69 is expressed equally in the human endocrine and exocrine pancreas

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Signal transduction by activated mNotch: importance of proteolytic processing and its regulation by the extracellular domain.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Constitutively active human Notch1 binds to the transcription factor CBF1 and stimulates transcription through a promoter containing a CBF1-responsive element

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Requirement for LIM homeobox gene Isl1 in motor neuron generation reveals a motor neuron-dependent step in interneuron differentiation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Developmental regulation of islet-1 mRNA expression during neuronal differentiation in embryonic zebrafish

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Signalling downstream of activated mammalian Notch

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

TAN-1, the human homolog of the Drosophila Notch gene, is broken by chromosomal translocations in T lymphoblastic neoplasms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

21 June 2018

Suppressor of hairless directly activates transcription of enhancer of split complex genes in response to Notch receptor activity

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

beamter/deltaC and the role of Notch ligands in the zebrafish somite segmentation, hindbrain neurogenesis and hypochord differentiation

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

The characterization of zebrafish antimorphic mib alleles reveals that Mib and Mind bomb-2 (Mib2) function redundantly

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

Zebrafish Mib and Mib2 are mutual E3 ubiquitin ligases with common and specific delta substrates

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

Notch inhibits Ptf1 function and acinar cell differentiation in developing mouse and zebrafish pancreas

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

Evolutionary conserved role of ptf1a in the specification of exocrine pancreatic fates

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

Exocrine pancreas development in zebrafish

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

Microarrays: biotechnology's discovery platform for functional genomics.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

Single-cell transcript analysis of pancreas development.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

Global expression analysis of gene regulatory pathways during endocrine pancreatic development.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

Rhombomere boundaries are Wnt signaling centers that regulate metameric patterning in the zebrafish hindbrain

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

Wnt1 regulates neurogenesis and mediates lateral inhibition of boundary cell specification in the zebrafish hindbrain

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

Delta-Notch signaling regulates oligodendrocyte specification

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

Patterning of proneuronal and inter-proneuronal domains by hairy- and enhancer of split-related genes in zebrafish neuroectoderm

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

Integrinalpha5 and delta/notch signaling have complementary spatiotemporal requirements during zebrafish somitogenesis

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

Extrinsic and intrinsic factors governing cell fate in cortical progenitor cultures

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

Visualization of spatiotemporal activation of Notch signaling: live monitoring and significance in neural development.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

Cellular distribution and ontogeny of insulin-like growth factors (IGFs) and IGF binding protein messenger RNAs and peptides in developing rat pancreas.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

Insulin-like growth factors and pancreas beta cells

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

Islet1 and Islet2 have equivalent abilities to promote motoneuron formation and to specify motoneuron subtype identity

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

Hedgehog signalling controls zebrafish neural keel morphogenesis via its level-dependent effects on neurogenesis.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

Discontinuous organization and specification of the lateral floor plate in zebrafish

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

Pdx-1 knockdown reduces insulin promoter activity in zebrafish.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

ICA69 is expressed equally in the human endocrine and exocrine pancreas

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

Hairy/E(spl)-related (Her) genes are central components of the segmentation oscillator and display redundancy with the Delta/Notch signaling pathway in the formation of anterior segmental boundaries in the zebrafish.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

31 October 2018

her1 and the notch pathway function within the oscillator mechanism that regulates zebrafish somitogenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

31 October 2018

her4, a zebrafish homologue of the Drosophila neurogenic gene E(spl), is a target of NOTCH signalling.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

31 October 2018

Regulation of neuronal specification in the zebrafish spinal cord by Delta function.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2195453

31 October 2018

The Pax4 gene is essential for differentiation of insulin-producing β cells in the mammalian pancreas

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

Pax6 is required for differentiation of glucagon-producing α-cells in mouse pancreas

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0001479

21 January 2018

Itch genetically interacts with Notch1 in a mouse autoimmune disease model

1 reference

https://pubmed.ncbi.nlm.nih.gov/18213387

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transcriptome kinetics of arsenic-induced adaptive response in zebrafish liver

1 reference

https://pubmed.ncbi.nlm.nih.gov/18213387

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0001479

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

2008PLoSO...3.1479H

0 references

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

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