(Q33321275)

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Coamplification of eukaryotic DNA with 16S rRNA gene-based PCR primers: possible consequences for population fingerprinting of complex microbial communities

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scholarly article

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Europe PubMed Central

PubMed publication ID

25 July 2017

Coamplification of eukaryotic DNA with 16S rRNA gene-based PCR primers: possible consequences for population fingerprinting of complex microbial communities (English)

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Europe PubMed Central

PubMed publication ID

25 July 2017

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Marie Joossens

3

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object named as

Geert Huys

1

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Séverine Vermeire

6

object named as

Severine Vermeire

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

7

object named as

Jean Swings

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

author name string

Tom Vanhoutte

2

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Amal S Mahious

4

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Evie De Brandt

5

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Europe PubMed Central

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25 July 2017

publication date

27 February 2008

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Europe PubMed Central

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25 July 2017

Current Microbiology

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Europe PubMed Central

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25 July 2017

56

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Europe PubMed Central

PubMed publication ID

25 July 2017

6

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

553-557

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

https://scigraph.springernature.com/pub.10.1007/s00284-008-9122-z

0 references

Lactic acid bacteria evolution during winemaking: use of rpoB gene as a target for PCR-DGGE analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/18301945

12 December 2020

based on heuristic

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Sequence heterogeneities of genes encoding 16S rRNAs in Paenibacillus polymyxa detected by temperature gradient gel electrophoresis

1 reference

https://pubmed.ncbi.nlm.nih.gov/18301945

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

rpoB-based microbial community analysis avoids limitations inherent in 16S rRNA gene intraspecies heterogeneity.

1 reference

https://pubmed.ncbi.nlm.nih.gov/18301945

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular monitoring and characterization of the faecal microbiota of healthy dogs during fructan supplementation.

1 reference

https://pubmed.ncbi.nlm.nih.gov/18301945

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Ribosomal Database Project (RDP-II): sequences and tools for high-throughput rRNA analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/18301945

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A simple salting out procedure for extracting DNA from human nucleated cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/18301945

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Fecal excretion of human deoxyribonucleic acid as an index of inflammatory activity in ulcerative colitis.

1 reference

https://pubmed.ncbi.nlm.nih.gov/18301945

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Effect of primer mismatch, annealing temperature and PCR cycle number on 16S rRNA gene-targetting bacterial community analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/18301945

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bacterial evolution

1 reference

https://pubmed.ncbi.nlm.nih.gov/18301945

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cluster analysis, richness and biodiversity indexes derived from denaturing gradient gel electrophoresis fingerprints of bacterial communities demonstrate that traditional maize fermentations are driven by the transformation process

1 reference

https://pubmed.ncbi.nlm.nih.gov/18301945

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Temporal stability analysis of the microbiota in human feces by denaturing gradient gel electrophoresis using universal and group-specific 16S rRNA gene primers

1 reference

https://pubmed.ncbi.nlm.nih.gov/18301945

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phylogenetic identification and in situ detection of individual microbial cells without cultivation

1 reference

https://pubmed.ncbi.nlm.nih.gov/18301945

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ribosomal RNA-targeted nucleic acid probes for studies in microbial ecology

1 reference

https://pubmed.ncbi.nlm.nih.gov/18301945

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Polyphasic study of the spatial distribution of microorganisms in Mexican pozol, a fermented maize dough, demonstrates the need for cultivation-independent methods to investigate traditional fermentations

1 reference

https://pubmed.ncbi.nlm.nih.gov/18301945

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular and functional characterization of Lactobacillus sanfranciscensis strains isolated from sourdoughs.

1 reference

https://pubmed.ncbi.nlm.nih.gov/18301945

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Understanding Bias in Microbial Community Analysis Techniques due to rrn Operon Copy Number Heterogeneity

1 reference

https://pubmed.ncbi.nlm.nih.gov/18301945

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of microorganisms by PCR amplification and sequencing of a universal amplified ribosomal region present in both prokaryotes and eukaryotes.

1 reference

https://pubmed.ncbi.nlm.nih.gov/18301945

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bacterial diversity of soils assessed by DGGE, T-RFLP and SSCP fingerprints of PCR-amplified 16S rRNA gene fragments: Do the different methods provide similar results?

1 reference

https://pubmed.ncbi.nlm.nih.gov/18301945

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Prokaryotic Genome Size and SSU rDNA Copy Number: Estimation of Microbial Relative Abundance from a Mixed Population

1 reference

https://pubmed.ncbi.nlm.nih.gov/18301945

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/18301945

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1007/S00284-008-9122-Z

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

Dimensions Publication ID

0 references

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

25 July 2017

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