(Q33349770)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20833728%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

title

Digital gene expression signatures for maize development (English)

1 reference

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13 February 2020

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20833728%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Alexander Goldshmidt

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20833728%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

7

Doreen Ware

1 reference

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13 February 2020

author name string

Namiko Satoh-Nagasawa

2

1 reference

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13 February 2020

Sandra Meyer

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20833728%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Mary Beatty

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20833728%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

Hajime Sakai

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20833728%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

David Jackson

8

1 reference

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13 February 2020

language of work or name

English

0 references

publication date

10 September 2010

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20833728%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

number of pages

16

1 reference

inferred from page(s)

published in

Plant Physiology

1 reference

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13 February 2020

volume

154

1 reference

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13 February 2020

issue

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20833728%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

page(s)

1024-1039

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20833728%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

13 February 2020

copyright license

start time

25 January 2021

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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SCHIZORIZA encodes a nuclear factor regulating asymmetry of stem cell divisions in the Arabidopsis root.

25 November 2018

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The B73 Maize Genome: Complexity, Diversity, and Dynamics

25 November 2018

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25 November 2018

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Unbiased reconstruction of a mammalian transcriptional network mediating pathogen responses

25 November 2018

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An R2R3-type transcription factor gene AtMYB59 regulates root growth and cell cycle progression in Arabidopsis.

25 November 2018

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25 November 2018

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Next-generation tag sequencing for cancer gene expression profiling

25 November 2018

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25 November 2018

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25 November 2018

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Target genes of the MADS transcription factor SEPALLATA3: integration of developmental and hormonal pathways in the Arabidopsis flower

25 November 2018

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Genome-wide and organ-specific landscapes of epigenetic modifications and their relationships to mRNA and small RNA transcriptomes in maize

25 November 2018

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mRNA-Seq whole-transcriptome analysis of a single cell

25 November 2018

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Computational and analytical framework for small RNA profiling by high-throughput sequencing

25 November 2018

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A functional genomics approach reveals CHE as a component of the Arabidopsis circadian clock

25 November 2018

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Transcriptomics: The digital generation

25 November 2018

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Next is now: new technologies for sequencing of genomes, transcriptomes, and beyond

25 November 2018

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Determination of tag density required for digital transcriptome analysis: application to an androgen-sensitive prostate cancer model

25 November 2018

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25 November 2018

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25 November 2018

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Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing

25 November 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Alternative isoform regulation in human tissue transcriptomes

25 November 2018

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NCBI GEO: archive for high-throughput functional genomic data

25 November 2018

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Insights into corn genes derived from large-scale cDNA sequencing

25 November 2018

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Structure and function of a transcriptional network activated by the MAPK Hog1.

25 November 2018

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Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms

25 November 2018

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A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome

25 November 2018

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RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays

25 November 2018

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Mapping and quantifying mammalian transcriptomes by RNA-Seq

25 November 2018

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Highly integrated single-base resolution maps of the epigenome in Arabidopsis

25 November 2018

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The AtGenExpress hormone and chemical treatment data set: experimental design, data evaluation, model data analysis and data access

25 November 2018

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Uncovering a macrophage transcriptional program by integrating evidence from motif scanning and expression dynamics

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Annotating genes of known and unknown function by large-scale coexpression analysis

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Systems approach identifies an organic nitrogen-responsive gene network that is regulated by the master clock control gene CCA1

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Utilizing tiling microarrays for whole-genome analysis in plants

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Genome-wide allele-specific expression analysis using Massively Parallel Signature Sequencing (MPSS) reveals cis- and trans-effects on gene expression in maize hybrid meristem tissue.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Transcript profiling by 3'-untranslated region sequencing resolves expression of gene families

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Gramene: a growing plant comparative genomics resource

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Moderated statistical tests for assessing differences in tag abundance

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Small-sample estimation of negative binomial dispersion, with applications to SAGE data

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

SNP discovery via 454 transcriptome sequencing

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Physical and genetic structure of the maize genome reflects its complex evolutionary history

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

An expression atlas of rice mRNAs and small RNAs

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Sampling the Arabidopsis transcriptome with massively parallel pyrosequencing

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Qualitative network models and genome-wide expression data define carbon/nitrogen-responsive molecular machines in Arabidopsis

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Nearly identical paralogs: implications for maize (Zea mays L.) genome evolution.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Gene discovery and annotation using LCM-454 transcriptome sequencing.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Sequence biases in large scale gene expression profiling data

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

A trehalose metabolic enzyme controls inflorescence architecture in maize

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Sugar sensing and signaling in plants: conserved and novel mechanisms

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Whole-genome analysis of the SHORT-ROOT developmental pathway in Arabidopsis

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Comparative profiling of the sense and antisense transcriptome of maize lines.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Organization and variability of the maize genome

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

The Arabidopsis genome: a foundation for plant research

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Trehalose 6-phosphate regulates starch synthesis via posttranslational redox activation of ADP-glucose pyrophosphorylase

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Architecture of floral branch systems in maize and related grasses

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Tag-based approaches for transcriptome research and genome annotation

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Bioconductor: open software development for computational biology and bioinformatics

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

GENEVESTIGATOR. Arabidopsis microarray database and analysis toolbox

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

The use of MPSS for whole-genome transcriptional analysis in Arabidopsis

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Comprehensive sampling of gene expression in human cell lines with massively parallel signature sequencing

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

The control of spikelet meristem identity by the branched silkless1 gene in maize

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Gene expression analysis by massively parallel signature sequencing (MPSS) on microbead arrays

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Serial analysis of gene expression

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971585

Genome-wide analysis of coordinate expression and evolution of human cis-encoded sense-antisense transcripts

25 November 2018

1 reference

12 December 2020

A new class of transcription factors mediates brassinosteroid-regulated gene expression in Arabidopsis

1 reference

12 December 2020

The Botany Array Resource: e-Northerns, Expression Angling, and promoter analyses

1 reference

12 December 2020

Regulatory functions of nuclear hexokinase1 complex in glucose signaling

1 reference

12 December 2020

Identifiers

DOI

10.1104/PP.110.159673

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20833728%20AND%20SRC:MED&resulttype=core&format=json

13 February 2020

PMC publication ID

2971585

0 references

1 reference