(Q33419581)

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The PickPocket method for predicting binding specificities for receptors based on receptor pocket similarities: application to MHC-peptide binding

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

The PickPocket method for predicting binding specificities for receptors based on receptor pocket similarities: application to MHC-peptide binding (English)

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

object named as

Morten Nielsen

3

0 references

object named as

Ole Lund

2

0 references

author name string

Hao Zhang

1

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

language of work or name

0 references

publication date

17 March 2009

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

number of pages

7

1 reference

based on heuristic

inferred from page(s)

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

25

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

10

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

1293-1299

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

NetMHCpan, a method for MHC class I binding prediction beyond humans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732311

21 June 2018

Pan-specific MHC class I predictors: a benchmark of HLA class I pan-specific prediction methods

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732311

21 June 2018

The peptide-binding specificity of HLA-A*3001 demonstrates membership of the HLA-A3 supertype

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732311

21 June 2018

Quantitative peptide binding motifs for 19 human and mouse MHC class I molecules derived using positional scanning combinatorial peptide libraries

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732311

21 June 2018

Efficient peptide-MHC-I binding prediction for alleles with few known binders.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732311

21 June 2018

NetMHCpan, a method for quantitative predictions of peptide binding to any HLA-A and -B locus protein of known sequence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732311

21 June 2018

A community resource benchmarking predictions of peptide binding to MHC-I molecules

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732311

21 June 2018

MULTIPRED: a computational system for prediction of promiscuous HLA binding peptides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732311

21 June 2018

Generating quantitative models describing the sequence specificity of biological processes with the stabilized matrix method

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732311

21 June 2018

Reliable prediction of T-cell epitopes using neural networks with novel sequence representations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732311

21 June 2018

Methods for prediction of peptide binding to MHC molecules: a comparative study.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732311

21 June 2018

Prediction of promiscuous peptides that bind HLA class I molecules

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732311

21 June 2018

The structure and stability of an HLA-A*0201/octameric tax peptide complex with an empty conserved peptide-N-terminal binding site

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732311

21 June 2018

Sequence logos: a new way to display consensus sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732311

21 June 2018

Amino acid substitution matrices from protein blocks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2732311

21 June 2018

Learning MHC I--peptide binding.

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP137

21 January 2018

Modeling the adaptive immune system: predictions and simulations

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP137

21 January 2018

A roadmap for the immunomics of category A-C pathogens

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP137

21 January 2018

Generation of tissue-specific and promiscuous HLA ligand databases using DNA microarrays and virtual HLA class II matrices

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTP137

21 January 2018

The IMGT/HLA database

1 reference

https://pubmed.ncbi.nlm.nih.gov/19297351

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/BIOINFORMATICS/BTP137

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

DBLP publication ID

journals/bioinformatics/ZhangLN09a

1 reference

DBLP Dataset 2021-01-02

28 January 2021

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

ResearchGate publication ID

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