(Q33425194)

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Characterization of transcription from TATA-less promoters: identification of a new core promoter element XCPE2 and analysis of factor requirements

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scholarly article

1 reference

Europe PubMed Central

26 July 2017

Characterization of transcription from TATA-less promoters: identification of a new core promoter element XCPE2 and analysis of factor requirements (English)

1 reference

Europe PubMed Central

26 July 2017

Ramakrishnan Anish

object named as

Ramakrishnan Anish

1

1 reference

ORCID Public Data File 2021

author name string

Mohammad B Hossain

2

1 reference

Europe PubMed Central

26 July 2017

Raymond H Jacobson

3

1 reference

Europe PubMed Central

26 July 2017

Shinako Takada

4

1 reference

Europe PubMed Central

26 July 2017

language of work or name

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publication date

1 April 2009

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Europe PubMed Central

26 July 2017

1 reference

Europe PubMed Central

26 July 2017

4

1 reference

Europe PubMed Central

26 July 2017

4

1 reference

Europe PubMed Central

26 July 2017

e5103

1 reference

Europe PubMed Central

26 July 2017

copyright license

Creative Commons Attribution 4.0 International

1 April 2009

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

A code for transcription initiation in mammalian genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

Mammalian RNA polymerase II core promoters: insights from genome-wide studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

New problems in RNA polymerase II transcription initiation: matching the diversity of core promoters with a variety of promoter recognition factors.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

The new core promoter element XCPE1 (X Core Promoter Element 1) directs activator-, mediator-, and TATA-binding protein-dependent but TFIID-independent RNA polymerase II transcription from TATA-less promoters

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

TAF4 nucleates a core subcomplex of TFIID and mediates activated transcription from a TATA-less promoter

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

SAGA binds TBP via its Spt8 subunit in competition with DNA: implications for TBP recruitment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

The general transcription machinery and general cofactors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

Mice and men: their promoter properties

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

Genome-wide analysis of mammalian promoter architecture and evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

Functional characterization of core promoter elements: the downstream core element is recognized by TAF1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

Improved PCR method for amplification of GC-rich DNA sequences.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

TAF1 histone acetyltransferase activity in Sp1 activation of the cyclin D1 promoter

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

Nuclear respiratory factor 1 plays an essential role in transcriptional initiation from the hepatitis B virus x gene promoter

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

Molecular architecture of the S. cerevisiae SAGA complex.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

Clustering of DNA sequences in human promoters

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

The MTE, a new core promoter element for transcription by RNA polymerase II.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

Human mediator enhances activator-facilitated recruitment of RNA polymerase II and promoter recognition by TATA-binding protein (TBP) independently of TBP-associated factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

A rapid purification method for human RNA polymerase II by two-step affinity chromatography

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

The RNA polymerase II core promoter

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

Novel subunits of the TATA binding protein free TAFII-containing transcription complex identified by matrix-assisted laser desorption/ionization-time of flight mass spectrometry following one-dimensional gel electrophoresis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

Computational analysis of core promoters in the Drosophila genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

The RNA polymerase II core promoter: a key component in the regulation of gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

Enhancer-promoter specificity mediated by DPE or TATA core promoter motifs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

Novel critical role of a human Mediator complex for basal RNA polymerase II transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

Identification and characterization of the potential promoter regions of 1031 kinds of human genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

The transcriptional cofactor complex CRSP is required for activity of the enhancer-binding protein Sp1

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

A human SPT3-TAFII31-GCN5-L acetylase complex distinct from transcription factor IID

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

TAFII-independent activation mediated by human TBP in the presence of the positive cofactor PC4

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

Transcription activation via enhanced preinitiation complex assembly in a human cell-free system lacking TAFIIs.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

Function of TAF(II)-containing complex without TBP in transcription by RNA polymerase II

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

Different core promoters possess distinct regulatory activities in the Drosophila embryo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

The downstream core promoter element, DPE, is conserved from Drosophila to humans and is recognized by TAFII60 of Drosophila

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

Accurate positioning of RNA polymerase II on a natural TATA-less promoter is independent of TATA-binding-protein-associated factors and initiator-binding proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

Promoter-selective transcriptional defect in cell cycle mutant ts13 rescued by hTAFII250.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

Importance of codon preference for production of human RAP74 and reconstitution of the RAP30/74 complex.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

Binding of TAFs to core elements directs promoter selectivity by RNA polymerase II.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

Complete nucleotide sequence of hepatitis B virus DNA of subtype adr and its conserved gene organization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

pSV00CAT: low background CAT plasmid

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

21 June 2018

Identification and Characterization of the Potential Promoter Regions of 1031 Kinds of Human Genes

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0005103

21 January 2018

The CCG1/TAFII250 gene is mutated in thermosensitive G1 mutants of the BHK21 cell line derived from golden hamster

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0005103

21 January 2018

Spacing requirements for simultaneous recognition of the adenovirus major late promoter TATAAAAG box and initiator element

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0005103

21 January 2018

Drosophila TFIID binds to a conserved downstream basal promoter element that is present in many TATA-box-deficient promoters

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0005103

21 January 2018

Identification and distinct regulation of yeast TATA box-containing genes.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0005103

21 January 2018

Hepatitis B virus X gene expression is activated by X protein but repressed by p53 tumor suppressor gene product in the transient expression system

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0005103

21 January 2018

A rapid and simple transcriptional sequencing method for GC-rich DNA regions.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2659449

31 October 2018

Role of core promoter structure in assembly of the RNA polymerase II preinitiation complex. A common pathway for formation of preinitiation intermediates at many TATA and TATA-less promoters

1 reference

https://pubmed.ncbi.nlm.nih.gov/19337366

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Selective recruitment of TAFs by yeast upstream activating sequences. Implications for eukaryotic promoter structure

1 reference

https://pubmed.ncbi.nlm.nih.gov/19337366

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Responses of four yeast genes to changes in the transcriptional machinery are determined by their promoters

1 reference

https://pubmed.ncbi.nlm.nih.gov/19337366

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0005103

1 reference

Europe PubMed Central

26 July 2017

2009PLoSO...4.5103A

0 references

1 reference

Europe PubMed Central

26 July 2017

1 reference

Europe PubMed Central

26 July 2017

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