(Q33449219)

26 July 2017

title

Structural plasticity of staphylococcal nuclease probed by perturbation with pressure and pH. (English)

1 reference

26 July 2017

Julien Roche

11

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Martin A. Schroer

object named as

Martin A Schroer

7

0 references

Catherine A. Royer

object named as

Catherine A Royer

14

0 references

Roland Winter

object named as

Roland Winter

10

0 references

author name string

Ryo Kitahara

1

1 reference

26 July 2017

Kazumi Hata

2

1 reference

26 July 2017

Akihiro Maeno

3

1 reference

26 July 2017

Kazuyuki Akasaka

4

1 reference

26 July 2017

Michael S Chimenti

5

1 reference

26 July 2017

Bertrand Garcia-Moreno E

6

1 reference

26 July 2017

Christoph Jeworrek

8

1 reference

26 July 2017

Metin Tolan

9

1 reference

26 July 2017

Christian Roumestand

12

1 reference

26 July 2017

Karine Montet de Guillen

13

1 reference

26 July 2017

language of work or name

English

0 references

publication date

20 January 2011

1 reference

26 July 2017

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26 July 2017

volume

79

1 reference

26 July 2017

issue

4

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26 July 2017

page(s)

1293-1305

1 reference

Structural origins of high apparent dielectric constants experienced by ionizable groups in the hydrophobic core of a protein

26 July 2017

cites work

1 reference

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Unique features of the folding landscape of a repeat protein revealed by pressure perturbation

21 June 2018

1 reference

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Conformational consequences of ionization of Lys, Asp, and Glu buried at position 66 in staphylococcal nuclease

21 June 2018

1 reference

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Protein vivisection reveals elusive intermediates in folding

21 June 2018

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Molecular determinants of the pKa values of Asp and Glu residues in staphylococcal nuclease

21 June 2018

1 reference

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Random walk in orthogonal space to achieve efficient free-energy simulation of complex systems

21 June 2018

1 reference

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High tolerance for ionizable residues in the hydrophobic interior of proteins

21 June 2018

1 reference

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pKa of residue 66 in Staphylococal nuclease. I. Insights from QM/MM simulations with conventional sampling.

21 June 2018

1 reference

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Electrostatic effects in a network of polar and ionizable groups in staphylococcal nuclease

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427779

Direct evidence for deprotonation of a lysine side chain buried in the hydrophobic core of a protein.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427779

Probing invisible, low-populated States of protein molecules by relaxation dispersion NMR spectroscopy: an application to protein folding

21 June 2018

1 reference

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Role of flexibility and polarity as determinants of the hydration of internal cavities and pockets in proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427779

Protein-protein interactions in complex cosolvent solutions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427779

High Apparent Dielectric Constant Inside a Protein Reflects Structural Reorganization Coupled to the Ionization of an Internal Asp

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427779

Probing conformational fluctuation of proteins by pressure perturbation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427779

Probing the transition state ensemble of a protein folding reaction by pressure-dependent NMR relaxation dispersion

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427779

Hydration and packing along the folding pathway of SH3 domains by pressure-dependent NMR.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427779

Hydration of the folding transition state ensemble of a protein.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427779

Random-coil behavior and the dimensions of chemically unfolded proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427779

Highly fluctuating protein structures revealed by variable-pressure nuclear magnetic resonance.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427779

Experimental pK(a) values of buried residues: analysis with continuum methods and role of water penetration

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427779

Revisiting volume changes in pressure-induced protein unfolding.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427779

Pressure provides new insights into protein folding, dynamics and structure

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427779

Low-lying excited states of proteins revealed from nonlinear pressure shifts in 1H and 15N NMR.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427779

Pressure-jump small-angle x-ray scattering detected kinetics of staphylococcal nuclease folding

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427779

Effect of hydrostatic pressure on unfolding of alpha-lactalbumin: volumetric equivalence of the molten globule and unfolded state

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427779

Molten-globule conformation of Arc repressor monomers determined by high-pressure 1H NMR spectroscopy.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427779

Primary structure effects on peptide group hydrogen exchange

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427779

Analysis of binding in macromolecular complexes: a generalized numerical approach

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427779

In a staphylococcal nuclease mutant the side-chain of a lysine replacing valine 66 is fully buried in the hydrophobic core

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427779

Numerical analysis of binding data: advantages, practical aspects, and implications

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427779

Experimental measurement of the effective dielectric in the hydrophobic core of a protein.

21 June 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22966

V(i)-value analysis: a pressure-based method for mapping the folding transition state ensemble of proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22966

Towards a quantitative understanding of protein hydration and volumetric properties

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22966

Exploring the temperature-pressure phase diagram of staphylococcal nuclease.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22966

Small-angle scattering studies of biological macromolecules in solution

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22966

DAMMIF, a program for rapid ab-initio shape determination in small-angle scattering

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22966

Effect of osmolytes on pressure-induced unfolding of proteins: a high-pressure SAXS study

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22966

Automated matching of high- and low-resolution structural models

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22966

The small-angle and wide-angle X-ray scattering set-up at beamline BL9 of DELTA.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3427779

Structural characterization of the pressure-denatured state and unfolding/refolding kinetics of staphylococcal nuclease by synchrotron small-angle X-ray scattering and Fourier-transform infrared spectroscopy 1 1Edited by P. E. Wright

31 October 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22966

In a staphylococcal nuclease mutant the side-chain of a lysine replacing valine 66 is fully buried in the hydrophobic core

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2FPROT.22966

Filling a cavity dramatically increases pressure stability of the c-Myb R2 subdomain

21 January 2018

1 reference

12 December 2020

Unraveling protein dynamics through fast spectral density mapping

1 reference

12 December 2020

Structural characterization of the molten globule and native states of apomyoglobin by solution X-ray scattering

1 reference

12 December 2020

A stable partly denatured state of trypsin induced by high hydrostatic pressure

1 reference

12 December 2020

Identifiers

DOI

10.1002/PROT.22966

1 reference

26 July 2017

1 reference

26 July 2017

1 reference