(Q33479985)

27 July 2017

title

Novel organization of aromatic degradation pathway genes in a microbial community as revealed by metagenomic analysis (English)

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27 July 2017

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5

Hirokazu Yano

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27 July 2017

Hikaru Suenaga

1

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Ryo Miyazaki

object named as

Ryo Miyazaki

4

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Masatoshi Miyakoshi

object named as

Masatoshi Miyakoshi

3

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author name string

Yoshinori Koyama

2

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27 July 2017

Masahiro Sota

6

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27 July 2017

Yoshiyuki Ohtsubo

7

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27 July 2017

Masataka Tsuda

8

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27 July 2017

Kentaro Miyazaki

9

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27 July 2017

publication date

9 July 2009

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27 July 2017

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27 July 2017

volume

3

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27 July 2017

issue

12

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27 July 2017

page(s)

1335-1348

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Informatics for unveiling hidden genome signatures

27 July 2017

cites work

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https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Arrangement and regulation of the genes for meta-pathway enzymes required for degradation of phenol in Comamonas testosteroni TA441.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Transposable modules generated by a single copy of insertion sequence ISPme1 and their influence on structure and evolution of natural plasmids of Paracoccus methylutens DM12.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Structural and replicative diversity of large plasmids from sphingomonads that degrade polycyclic aromatic compounds and xenobiotics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Protein synthesis patterns in Acinetobacter calcoaceticus induced by phenol and catechol show specificities of responses to chemostress.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

The repABC plasmid family.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

The evolution of IncP catabolic plasmids.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Phenol/cresol degradation by the thermophilic Bacillus thermoglucosidasius A7: cloning and sequence analysis of five genes involved in the pathway

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

The SXT conjugative element and linear prophage N15 encode toxin-antitoxin-stabilizing systems homologous to the tad-ata module of the Paracoccus aminophilus plasmid pAMI2.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Evolutionary relationships among extradiol dioxygenases

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Biological degradation of 2,4,6-trinitrotoluene

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

The Pfam protein families database

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Biphenyl dioxygenases: functional versatilities and directed evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Exploring the microbial biodegradation and biotransformation gene pool

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Aromatic hydrocarbon dioxygenases in environmental biotechnology

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Metabolic diversity in aromatic compound utilization by anaerobic microbes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Functional gene diversity analysis in BTEX contaminated soils by means of PCR-SSCP DNA fingerprinting: comparative diversity assessment against bacterial isolates and PCR-DNA clone libraries

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Four genes, two ends, and a res region are involved in transposition of Tn5053: a paradigm for a novel family of transposons carrying either a mer operon or an integron

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Tn5053 family transposons are res site hunters sensing plasmidal res sites occupied by cognate resolvases

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Surveying biotransformations with à la carte genetic traps: translating dehydrochlorination of lindane (gamma-hexachlorocyclohexane) into lacZ-based phenotypes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Divergence of mobile genetic elements involved in the distribution of xenobiotic-catabolic capacity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

GenomeMatcher: a graphical user interface for DNA sequence comparison

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

InterProScan: protein domains identifier

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Artemis: sequence visualization and annotation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Nucleotide sequence and functional analysis of the complete phenol/3,4-dimethylphenol catabolic pathway of Pseudomonas sp. strain CF600

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

High aromatic ring-cleavage diversity in birch rhizosphere: PAH treatment-specific changes of I.E.3 group extradiol dioxygenases and 16S rRNA bacterial communities in soil

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Genomic and functional analysis of the IncP-9 naphthalene-catabolic plasmid NAH7 and its transposon Tn4655 suggests catabolic gene spread by a tyrosine recombinase

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Functional analysis of unique class II insertion sequence IS1071.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Functional screening of a metagenomic library for genes involved in microbial degradation of aromatic compounds

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Sequence of the 68,869 bp IncP-1alpha plasmid pTB11 from a waste-water treatment plant reveals a highly conserved backbone, a Tn402-like integron and other transposable elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

The role of mobile genetic elements in bacterial adaptation to xenobiotic organic compounds

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

The biphenyl- and 4-chlorobiphenyl-catabolic transposon Tn4371, a member of a new family of genomic islands related to IncP and Ti plasmids.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Mobile catabolic genes in bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Harnessing the catabolic diversity of rhodococci for environmental and biotechnological applications

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Versatile transcription of biphenyl catabolic bph operon in Pseudomonas pseudoalcaligenes KF707.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

The evolution of pathways for aromatic hydrocarbon oxidation in Pseudomonas.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

nag genes of Ralstonia (formerly Pseudomonas) sp. strain U2 encoding enzymes for gentisate catabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

Complete nucleotide sequence of the catechol metabolic region of plasmid pTDN1

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

7 January 2021

A Tn7-like transposon is present in the glmUS region of the obligately chemoautolithotrophic bacterium Thiobacillus ferrooxidans

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

7 January 2021

The mating pair formation system of conjugative plasmids-A versatile secretion machinery for transfer of proteins and DNA.

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

7 January 2021

Degradation of dioxin-like compounds by microorganisms

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https://api.crossref.org/works/10.1038%2FISMEJ.2009.76

7 January 2021

Identifiers

DOI

10.1038/ISMEJ.2009.76

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Dimensions Publication ID

27 July 2017

1050837267

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