(Q33511234)

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Transcription analysis of central metabolism genes in Escherichia coli. Possible roles of sigma38 in their expression, as a response to carbon limitation

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scholarly article

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Europe PubMed Central

PubMed publication ID

27 July 2017

Transcription analysis of central metabolism genes in Escherichia coli. Possible roles of sigma38 in their expression, as a response to carbon limitation (English)

1 reference

Europe PubMed Central

PubMed publication ID

27 July 2017

Escherichia coli

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based on heuristic

inferred from title

object named as

Enrique Morett

7

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Guillermo Gosset

6

object named as

Guillermo Gosset

1 reference

Europe PubMed Central

PubMed publication ID

27 July 2017

author name string

Leticia Olvera

1

1 reference

Europe PubMed Central

PubMed publication ID

27 July 2017

Alfredo Mendoza-Vargas

2

1 reference

Europe PubMed Central

PubMed publication ID

27 July 2017

Noemí Flores

3

1 reference

Europe PubMed Central

PubMed publication ID

27 July 2017

Maricela Olvera

4

1 reference

Europe PubMed Central

PubMed publication ID

27 July 2017

Juan Carlos Sigala

5

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Europe PubMed Central

PubMed publication ID

27 July 2017

Francisco Bolívar

8

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Europe PubMed Central

PubMed publication ID

27 July 2017

language of work or name

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publication date

19 October 2009

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Europe PubMed Central

PubMed publication ID

27 July 2017

1 reference

Europe PubMed Central

PubMed publication ID

27 July 2017

4

1 reference

Europe PubMed Central

PubMed publication ID

27 July 2017

10

1 reference

Europe PubMed Central

PubMed publication ID

27 July 2017

e7466

1 reference

Europe PubMed Central

PubMed publication ID

27 July 2017

copyright license

Creative Commons Attribution 4.0 International

19 October 2009

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

Coutilization of glucose and glycerol enhances the production of aromatic compounds in an Escherichia coli strain lacking the phosphoenolpyruvate: carbohydrate phosphotransferase system

1 reference

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21 June 2018

The molecular basis of selective promoter activation by the sigmaS subunit of RNA polymerase.

1 reference

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21 June 2018

Regulon and promoter analysis of the E. coli heat-shock factor, sigma32, reveals a multifaceted cellular response to heat stress

1 reference

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21 June 2018

Conserved and variable functions of the sigmaE stress response in related genomes

1 reference

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21 June 2018

Systematic search for the Cra-binding promoters using genomic SELEX system.

1 reference

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1 reference

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Impact of global transcriptional regulation by ArcA, ArcB, Cra, Crp, Cya, Fnr, and Mlc on glucose catabolism in Escherichia coli

1 reference

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The acetate switch

1 reference

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Genome-wide analysis of the general stress response network in Escherichia coli: sigmaS-dependent genes, promoters, and sigma factor selectivity

1 reference

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21 June 2018

Growth versus maintenance: a trade-off dictated by RNA polymerase availability and sigma factor competition?

1 reference

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Diversion of the metabolic flux from pyruvate dehydrogenase to pyruvate oxidase decreases oxidative stress during glucose metabolism in nongrowing Escherichia coli cells incubated under aerobic, phosphate starvation conditions

1 reference

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SigmaS-dependent gene expression at the onset of stationary phase in Escherichia coli: function of sigmaS-dependent genes and identification of their promoter sequences.

1 reference

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21 June 2018

The strong efficiency of the Escherichia coli gapA P1 promoter depends on a complex combination of functional determinants

1 reference

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21 June 2018

Structural basis for transcription regulation by alarmone ppGpp.

1 reference

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21 June 2018

Analysis of gene expression in Escherichia coli in response to changes of growth-limiting nutrient in chemostat cultures

1 reference

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21 June 2018

The regulation of bacterial transcription initiation

1 reference

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21 June 2018

Probing the ArcA-P modulon of Escherichia coli by whole genome transcriptional analysis and sequence recognition profiling.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759082

21 June 2018

The gene yjcG, cotranscribed with the gene acs, encodes an acetate permease in Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759082

21 June 2018

Cyclic AMP receptor protein-dependent activation of the Escherichia coli acsP2 promoter by a synergistic class III mechanism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759082

21 June 2018

Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759082

21 June 2018

Regulation of sigma factor competition by the alarmone ppGpp

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759082

21 June 2018

Hungry bacteria--definition and properties of a nutritional state

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759082

21 June 2018

Pyruvate oxidase contributes to the aerobic growth efficiency of Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759082

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Transcriptional regulation of the orf19 gene and the tir-cesT-eae operon of enteropathogenic Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759082

21 June 2018

Mechanism of regulation of transcription initiation by ppGpp. II. Models for positive control based on properties of RNAP mutants and competition for RNAP.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759082

21 June 2018

Negative control of rpoS expression by phosphoenolpyruvate: carbohydrate phosphotransferase system in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759082

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Competition among seven Escherichia coli sigma subunits: relative binding affinities to the core RNA polymerase

1 reference

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Vectorial metabolism and the evolution of transport systems

1 reference

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sigma(70) is the principal sigma factor responsible for transcription of acs, which encodes acetyl coenzyme A synthetase in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759082

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The EIIGlc protein is involved in glucose-mediated activation of Escherichia coli gapA and gapB-pgk transcription

1 reference

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Molecular characterization of glucokinase from Escherichia coli K-12.

1 reference

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21 June 2018

The catabolite repressor/activator (Cra) protein of enteric bacteria

1 reference

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21 June 2018

Sequences in the -35 region of Escherichia coli rpoS-dependent genes promote transcription by E sigma S.

1 reference

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21 June 2018

Frur mediates catabolite activation of pyruvate kinase (pykF) gene expression in Escherichia coli

1 reference

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21 June 2018

The Escherichia coli gapA gene is transcribed by the vegetative RNA polymerase holoenzyme E sigma 70 and by the heat shock RNA polymerase E sigma 32.

1 reference

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Between feast and famine: endogenous inducer synthesis in the adaptation of Escherichia coli to growth with limiting carbohydrates

1 reference

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21 June 2018

Expression of Escherichia coli pyruvate oxidase (PoxB) depends on the sigma factor encoded by the rpoS(katF) gene.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759082

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Cloning, characterization, and functional expression of acs, the gene which encodes acetyl coenzyme A synthetase in Escherichia coli

1 reference

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Selectivity of the Escherichia coli RNA polymerase E sigma 38 for overlapping promoters and ability to support CRP activation

1 reference

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Revolutions in rapid amplification of cDNA ends: new strategies for polymerase chain reaction cloning of full-length cDNA ends

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759082

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2759082

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Nucleotide sequence of the triose phosphate isomerase gene of Escherichia coli

1 reference

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Nucleotide sequence and high-level expression of the major Escherichia coli phosphofructokinase.

1 reference

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arcA (dye), a global regulatory gene in Escherichia coli mediating repression of enzymes in aerobic pathways

1 reference

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Isolation and characterization of the phosphoglucose isomerase gene from Escherichia coli

1 reference

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1 reference

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Phosphorylation of D-glucose in Escherichia coli mutants defective in glucosephosphotransferase, mannosephosphotransferase, and glucokinase

1 reference

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Construction and characterization of new cloning vehicle. II. A multipurpose cloning system

1 reference

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Adaptation for fast growth on glucose by differential expression of central carbon metabolism and gal regulon genes in an Escherichia coli strain lacking the phosphoenolpyruvate:carbohydrate phosphotransferase system

1 reference

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21 January 2018

What is driving the acquisition of mutS and rpoS polymorphisms in Escherichia coli?

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0007466

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Effect of rpoS gene knockout on the metabolism of Escherichia coli during exponential growth phase and early stationary phase based on gene expressions, enzyme activities and intracellular metabolite concentrations

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0007466

21 January 2018

RpoS regulation of gene expression during exponential growth of Escherichia coli K12.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0007466

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New insights into the role of sigma factor RpoS as revealed in escherichia coli strains lacking the phosphoenolpyruvate:carbohydrate phosphotransferase system.

1 reference

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1 reference

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Selective repression by Fis and H-NS at the Escherichia coli dps promoter.

1 reference

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Extensive functional overlap between sigma factors in Escherichia coli.

1 reference

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21 January 2018

Pathway engineering for the production of aromatic compounds in Escherichia coli.

1 reference

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21 January 2018

Analysis of carbon metabolism in Escherichia coli strains with an inactive phosphotransferase system by (13)C labeling and NMR spectroscopy

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21 January 2018

Role of pyruvate oxidase in Escherichia coli strains lacking the phosphoenolpyruvate:carbohydrate phosphotransferase system

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21 January 2018

Metabolic engineering and protein directed evolution increase the yield of L-phenylalanine synthesized from glucose in Escherichia coli

1 reference

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21 January 2018

Nutrient-scavenging stress response in an Escherichia coli strain lacking the phosphoenolpyruvate: carbohydrate phosphotransferase system, as explored by gene expression profile analysis

1 reference

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21 January 2018

GeConT: gene context analysis.

1 reference

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21 January 2018

A method for direct cloning of fur-regulated genes: identification of seven new fur-regulated loci in Escherichia coli.

1 reference

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21 January 2018

The pdhR-aceEF-lpd operon of Escherichia coli expresses the pyruvate dehydrogenase complex.

1 reference

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21 January 2018

Systematic discovery of analogous enzymes in thiamin biosynthesis

1 reference

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21 January 2018

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1 reference

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31 October 2018

Involvement of differential efficiency of transcription by esigmas and esigma70 RNA polymerase holoenzymes in growth phase regulation of the Escherichia coli osmE promoter

1 reference

https://pubmed.ncbi.nlm.nih.gov/19838295

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Promoter recognition and discrimination by EsigmaS RNA polymerase

1 reference

https://pubmed.ncbi.nlm.nih.gov/19838295

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transcription analysis of the sucAB, aceEF and lpd genes of Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/19838295

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Co-regulation of lipoamide dehydrogenase and 2-oxoglutarate dehydrogenase synthesis in Escherichia coli: characterisation of an ArcA binding site in the lpd promoter

1 reference

https://pubmed.ncbi.nlm.nih.gov/19838295

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0007466

1 reference

Europe PubMed Central

PubMed publication ID

27 July 2017

2009PLoSO...4.7466O

0 references

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

27 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

27 July 2017

ResearchGate publication ID

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