(Q33526946)

27 July 2017

title

Improving small-angle X-ray scattering data for structural analyses of the RNA world (English)

1 reference

X-ray scattering techniques

27 July 2017

main subject

1 reference

John A Tainer

2

0 references

author name string

Robert P Rambo

series ordinal

1

1 reference

27 July 2017

language of work or name

English

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publication date

27 January 2010

1 reference

27 July 2017

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27 July 2017

volume

16

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27 July 2017

issue

3

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27 July 2017

page(s)

638-646

1 reference

Robust, high-throughput solution structural analyses by small angle X-ray scattering (SAXS)

27 July 2017

cites work

1 reference

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Comparison and functional implications of the 3D architectures of viral tRNA-like structures

21 June 2018

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Solution structure of tRNAVal from refinement of homology model against residual dipolar coupling and SAXS data

21 June 2018

1 reference

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The complete VS ribozyme in solution studied by small-angle X-ray scattering

21 June 2018

1 reference

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Crystal structure of the lysine riboswitch regulatory mRNA element

21 June 2018

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An overview of RNA structure prediction and applications to RNA gene prediction and RNAi design

21 June 2018

1 reference

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Folding of the SAM aptamer is determined by the formation of a K-turn-dependent pseudoknot

21 June 2018

1 reference

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Synthetic antibodies for specific recognition and crystallization of structured RNA

21 June 2018

1 reference

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X-ray solution scattering (SAXS) combined with crystallography and computation: defining accurate macromolecular structures, conformations and assemblies in solution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2822928

OligoCalc: an online oligonucleotide properties calculator.

21 June 2018

1 reference

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Structural transitions and thermodynamics of a glycine-dependent riboswitch from Vibrio cholerae

21 June 2018

1 reference

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Structure of the S-adenosylmethionine riboswitch regulatory mRNA element

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2822928

A general method for rapid and nondenaturing purification of RNAs

21 June 2018

1 reference

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Large-scale preparation and purification of polyacrylamide-free RNA oligonucleotides

21 June 2018

1 reference

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An mRNA structure in bacteria that controls gene expression by binding lysine

21 June 2018

1 reference

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An mRNA structure that controls gene expression by binding S-adenosylmethionine

21 June 2018

1 reference

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Transcription termination control of the S box system: direct measurement of S-adenosylmethionine by the leader RNA.

21 June 2018

1 reference

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Changes in biomolecular conformation seen by small angle X-ray scattering

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2822928

Derivation of a structural model for the c-myc IRES

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2822928

Beyond kinetic traps in RNA folding

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2822928

Determination of domain structure of proteins from X-ray solution scattering

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2822928

Protein NMR spectroscopy in structural genomics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2822928

Multiple folding pathways for the P4-P6 RNA domain

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2822928

Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2822928

An optimal Mg(2+) concentration for kinetic folding of the tetrahymena ribozyme

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2822928

In vitro selection of RNAs with increased tertiary structure stability

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2822928

Restoring low resolution structure of biological macromolecules from solution scattering using simulated annealing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2822928

Situs: A package for docking crystal structures into low-resolution maps from electron microscopy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2822928

Low-resolution structures of proteins in solution retrieved from X-ray scattering with a genetic algorithm

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2822928

A lysozyme folding intermediate revealed by solution X-ray scattering.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2822928

21 June 2018

1 reference

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Architecture of a gamma retroviral genomic RNA dimer.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2822928

Assembly of an active group II intron-maturase complex by protein dimerization

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2822928

Compaction of a bacterial group I ribozyme coincides with the assembly of core helices

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2822928

Solution scattering structural analysis of the 70 S Escherichia coli ribosome by contrast variation. II. A model of the ribosome and its RNA at 3.5 nm resolution.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2822928

Structural analysis of flexible proteins in solution by small angle X-ray scattering combined with crystallography

31 October 2018

1 reference

12 December 2020

DAMMIF, a program for rapid ab-initio shape determination in small-angle scattering

1 reference

12 December 2020

The reactivity of anti-peptide antibodies is a function of the atomic mobility of sites in a protein

1 reference

12 December 2020

Preparation of homogeneous ribozyme RNA for crystallization

1 reference

12 December 2020

Kinetic intermediates trapped by native interactions in RNA folding

1 reference

12 December 2020

Identifiers

DOI

10.1261/RNA.1946310

1 reference

27 July 2017

1 reference

27 July 2017

1 reference