(Q33533480)

27 July 2017

title

A new protein binding pocket similarity measure based on comparison of clouds of atoms in 3D: application to ligand prediction (English)

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27 July 2017

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Brice Hoffmann

1

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Jean-Philippe Vert

object named as

Jean-Philippe Vert

series ordinal

3

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author name string

Mikhail Zaslavskiy

series ordinal

2

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27 July 2017

Véronique Stoven

series ordinal

4

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27 July 2017

publication date

22 February 2010

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27 July 2017

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27 July 2017

volume

11

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27 July 2017

page(s)

99

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https://scigraph.springernature.com/pub.10.1186/1471-2105-11-99

27 July 2017

exact match

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cites work

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1 reference

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14 July 2018

1 reference

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Shape variation in protein binding pockets and their ligands

14 July 2018

1 reference

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SitesBase: a database for structure-based protein-ligand binding site comparisons

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2838872

SiteEngines: recognition and comparison of binding sites and protein-protein interfaces

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2838872

Real spherical harmonic expansion coefficients as 3D shape descriptors for protein binding pocket and ligand comparisons.

14 July 2018

1 reference

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Recognition of functional sites in protein structures.

14 July 2018

1 reference

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14 July 2018

1 reference

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A general method applicable to the search for similarities in the amino acid sequence of two proteins

14 July 2018

1 reference

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Detection of 3D atomic similarities and their use in the discrimination of small molecule protein-binding sites

14 July 2018

1 reference

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A simple and fuzzy method to align and compare druggable ligand-binding sites.

31 October 2018

1 reference

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31 October 2018

1 reference

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Multiple graph alignment for the structural analysis of protein active sites.

31 October 2018

1 reference

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A method for localizing ligand binding pockets in protein structures

31 October 2018

1 reference

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Q-SiteFinder: an energy-based method for the prediction of protein-ligand binding sites.

31 October 2018

1 reference

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31 October 2018

Identifiers

DOI

10.1186/1471-2105-11-99

1 reference

journals/bmcbi/HoffmannZVS10

27 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

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27 July 2017

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