(Q33551309)

28 July 2017

title

Efficient equilibrium sampling of all-atom peptides using library-based Monte Carlo (English)

1 reference

28 July 2017

1 reference

Daniel M Zuckerman

3

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author name string

Ying Ding

series ordinal

1

1 reference

28 July 2017

Artem B Mamonov

series ordinal

2

1 reference

28 July 2017

language of work or name

English

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publication date

1 May 2010

1 reference

Journal of Physical Chemistry B

28 July 2017

number of pages

8

1 reference

based on heuristic

inferred from page(s)

published in

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28 July 2017

volume

114

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28 July 2017

issue

17

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28 July 2017

page(s)

5870-5877

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Generalized Born model with a simple, robust molecular volume correction

28 July 2017

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Absolute free energies and equilibrium ensembles of dense fluids computed from a nondynamic growth method

21 June 2018

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General library-based Monte Carlo technique enables equilibrium sampling of semi-atomistic protein models

21 June 2018

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Absolute free energies estimated by combining precalculated molecular fragment libraries

21 June 2018

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21 June 2018

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Ten-microsecond molecular dynamics simulation of a fast-folding WW domain

21 June 2018

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21 June 2018

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Quantitative characterization of intrinsic disorder in polyglutamine: insights from analysis based on polymer theories

21 June 2018

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Ensemble-based convergence analysis of biomolecular trajectories

21 June 2018

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The limit of accuracy of protein modeling: influence of crystal packing on protein structure.

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Multicanonical ensemble: A new approach to simulate first-order phase transitions

21 June 2018

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Efficient Generalized Born Models for Monte Carlo Simulations.

21 June 2018

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Resolution Exchange Simulation with Incremental Coarsening.

31 October 2018

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Insight into the role of hydration on protein dynamics.

31 October 2018

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Resolution exchange simulation.

31 October 2018

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The conformation of tetraalanine in water determined by polarized Raman, FT-IR, and VCD spectroscopy

31 October 2018

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The precision of NMR structure ensembles revisited

31 October 2018

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Replica Monte Carlo simulation of spin glasses.

31 October 2018

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Efficient and direct generation of multidimensional free energy surfaces via adiabatic dynamics without coordinate transformations

31 October 2018

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PubMed

https://pubmed.ncbi.nlm.nih.gov/20380366

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Kinetics from Implicit Solvent Simulations of Biomolecules as a Function of Viscosity

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PubMed

https://pubmed.ncbi.nlm.nih.gov/20380366

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1021/JP910112D

1 reference

28 July 2017

1 reference

1 reference

28 July 2017

1 reference