(Q33559437)

28 July 2017

title

Two novel families of plasmids from hyperthermophilic archaea encoding new families of replication proteins (English)

1 reference

28 July 2017

0 references

Nicolas Soler

1

0 references

Guennadi Sezonov

object named as

Guennadi Sezonov

7

0 references

Herman van Tilbeurgh

6

object named as

Herman van Tilbeurgh

1 reference

28 July 2017

4

Nicole Desnoues

1 reference

28 July 2017

Evelyne Marguet

2

1 reference

28 July 2017

Diego Cortez

3

1 reference

28 July 2017

Jenny Keller

5

1 reference

28 July 2017

Patrick Forterre

8

1 reference

28 July 2017

language of work or name

English

0 references

publication date

18 April 2010

1 reference

28 July 2017

published in

Nucleic Acids Research

1 reference

28 July 2017

volume

38

1 reference

28 July 2017

issue

15

1 reference

28 July 2017

page(s)

5088-5104

1 reference

Creative Commons Attribution-NonCommercial 2.5 Generic

28 July 2017

copyright license

start time

7 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

Cytoscape

1 reference

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

based on heuristic

inferred from PubMed Central ID database lookup

cites work

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21 June 2018

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21 June 2018

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Evidence for the horizontal transfer of an integrase gene from a fusellovirus to a pRN-like plasmid within a single strain of Sulfolobus and the implications for plasmid survival

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Structure and mechanism of helicases and nucleic acid translocases

21 June 2018

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Characterization of the transcriptional activity of the cryptic plasmid pRN1 from Sulfolobus islandicus REN1H1 and regulation of its replication operon

21 June 2018

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Viruses of the Archaea: a unifying view

21 June 2018

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21 June 2018

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On the origin of microbial ORFans: quantifying the strength of the evidence for viral lateral transfer

21 June 2018

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Two novel conjugative plasmids from a single strain of Sulfolobus

21 June 2018

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21 June 2018

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From genomes to function: haloarchaea as model organisms

21 June 2018

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The origin of viruses and their possible roles in major evolutionary transitions

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Improved and versatile transformation system allowing multiple genetic manipulations of the hyperthermophilic archaeon Thermococcus kodakaraensis

21 June 2018

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21 June 2018

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Novel RepA-MCM proteins encoded in plasmids pTAU4, pORA1 and pTIK4 from Sulfolobus neozealandicus

21 June 2018

1 reference

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Genomic comparison of archaeal conjugative plasmids from Sulfolobus

21 June 2018

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Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes

21 June 2018

1 reference

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Genome sequence of Haloarcula marismortui: a halophilic archaeon from the Dead Sea

21 June 2018

1 reference

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MUSCLE: a multiple sequence alignment method with reduced time and space complexity

21 June 2018

1 reference

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The replication protein of the Sulfolobus islandicus plasmid pRN1.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2926602

Molecular diversity of new Thermococcales isolates from a single area of hydrothermal deep-sea vents as revealed by randomly amplified polymorphic DNA fingerprinting and 16S rRNA gene sequence analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2926602

Structure of a bifunctional DNA primase-polymerase

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2926602

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2926602

Relationships between fuselloviruses infecting the extremely thermophilic archaeon Sulfolobus: SSV1 and SSV2.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2926602

A novel type of replicative enzyme harbouring ATPase, primase and DNA polymerase activity

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2926602

Construction of a shuttle vector for, and spheroplast transformation of, the hyperthermophilic archaeon Pyrococcus abyssi

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2926602

The origin of DNA genomes and DNA replication proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2926602

Characterization of plasmid pRT1 from Pyrococcus sp. strain JT1.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2926602

The protein ORF80 from the acidophilic and thermophilic archaeon Sulfolobus islandicus binds highly site-specifically to double-stranded DNA and represents a novel type of basic leucine zipper protein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2926602

Thermostable and site-specific DNA binding of the gene product ORF56 from the Sulfolobus islandicus plasmid pRN1, a putative archael plasmid copy control protein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2926602

Control of plasmid DNA replication by iterons: no longer paradoxical

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2926602

The genetic element pSSVx of the extremely thermophilic crenarchaeon Sulfolobus is a hybrid between a plasmid and a virus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2926602

The active site of the rolling circle replication protein Rep75 is involved in site-specific nuclease, ligase and nucleotidyl transferase activities

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2926602

Displacement of cellular proteins by functional analogues from plasmids or viruses could explain puzzling phylogenies of many DNA informational proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2926602

Replication and control of circular bacterial plasmids.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2926602

Analyzing genomes with cumulative skew diagrams

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2926602

A rolling circle replication initiator protein with a nucleotidyl-transferase activity encoded by the plasmid pGT5 from the hyperthermophilic archaeon Pyrococcus abyssi

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2926602

Asymmetric substitution patterns in the two DNA strands of bacteria

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2926602

Sequence of plasmid pGT5 from the archaeon Pyrococcus abyssi: evidence for rolling-circle replication in a hyperthermophile

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2926602

A cryptic miniplasmid from the hyperthermophilic bacterium Thermotoga sp. strain RQ7.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2926602

Using the polymerase chain reaction to modify expression plasmids for epitope mapping.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2926602

Novel non-templated nucleotide addition reactions catalyzed by procaryotic and eucaryotic DNA polymerases

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2926602

Novel archaeal plasmid pAH1 and its interactions with the lipothrixvirus AFV1.

21 June 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ236

Production of recombinant and tagged proteins in the hyperthermophilic archaeon Sulfolobus solfataricus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ236

Helicases: amino acid sequence comparisons and structure-function relationships

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ236

Analysis of the first genome of a hyperthermophilic marine virus-like particle, PAV1, isolated from Pyrococcus abyssi

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ236

DNA translocation activity of the multifunctional replication protein ORF904 from the archaeal plasmid pRN1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ236

Virus-like vesicles and extracellular DNA produced by hyperthermophilic archaea of the order Thermococcales

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ236

Archaeal proviruses TKV4 and MVV extend the PRD1-adenovirus lineage to the phylum Euryarchaeota

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ236

Viral biogeography revealed by signatures in Sulfolobus islandicus genomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ236

A conserved 3'----5' exonuclease active site in prokaryotic and eukaryotic DNA polymerases

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20403814

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Molecular biology of the pRN1 plasmid from Sulfolobus islandicus

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20403814

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKQ236

1 reference

28 July 2017

1 reference

28 July 2017

1 reference