(Q33588090)

28 July 2017

title

Transcriptome analysis of the mobile genome ICEclc in Pseudomonas knackmussii B13. (English)

1 reference

28 July 2017

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Pseudomonas knackmussii

Pseudomonas knackmussii

1 reference

based on heuristic

inferred from title

author

Jan Roelof van der Meer

6

Jan Roelof van der Meer

0 references

David R Johnson

David R Johnson

5

0 references

author name string

Muriel Gaillard

1

1 reference

28 July 2017

Nicolas Pradervand

2

1 reference

28 July 2017

Marco Minoia

3

1 reference

28 July 2017

Vladimir Sentchilo

4

1 reference

28 July 2017

Jan Roelof van der Meer

6

1 reference

28 July 2017

publication date

26 May 2010

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28 July 2017

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28 July 2017

volume

10

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28 July 2017

page(s)

153

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describes a project that uses

28 July 2017

ImageQuant

Image Quant TL

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

The Crc global regulator binds to an unpaired A-rich motif at the Pseudomonas putida alkS mRNA coding sequence and inhibits translation initiation

1 reference

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Genomic islands: tools of bacterial horizontal gene transfer and evolution

28 July 2018

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High-resolution mapping of plasmid transcriptomes in different host bacteria

28 July 2018

1 reference

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Stochasticity and bistability in horizontal transfer control of a genomic island in Pseudomonas

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892462

Host and invader impact of transfer of the clc genomic island into Pseudomonas aeruginosa PAO1.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892462

Dynamics of Pseudomonas aeruginosa genome evolution

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892462

Global analysis of host response to induction of a latent bacteriophage

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892462

Transcription regulatory circuits in bacterial plasmids

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892462

The clc element of Pseudomonas sp. strain B13, a genomic island with various catabolic properties

28 July 2018

1 reference

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Biogenesis, architecture, and function of bacterial type IV secretion systems

28 July 2018

1 reference

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Horizontal gene transfer, genome innovation and evolution

28 July 2018

1 reference

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A generic approach for the design of whole-genome oligoarrays, validated for genomotyping, deletion mapping and gene expression analysis on Staphylococcus aureus

28 July 2018

1 reference

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Improved monomeric red, orange and yellow fluorescent proteins derived from Discosoma sp. red fluorescent protein

28 July 2018

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Transferable antibiotic resistance elements in Haemophilus influenzae share a common evolutionary origin with a diverse family of syntenic genomic islands

28 July 2018

1 reference

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Genomic islands in pathogenic and environmental microorganisms

28 July 2018

1 reference

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Exploration, normalization, and summaries of high density oligonucleotide array probe level data

28 July 2018

1 reference

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Control of SXT integration and excision

28 July 2018

1 reference

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Unusual integrase gene expression on the clc genomic island in Pseudomonas sp. strain B13.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892462

Spread and survival of promiscuous IncP-1 plasmids

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892462

Characterization of two alternative promoters for integrase expression in the clc genomic island of Pseudomonas sp. strain B13.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892462

OligoArray 2.0: design of oligonucleotide probes for DNA microarrays using a thermodynamic approach

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892462

A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892462

Genomic and functional analyses of SXT, an integrating antibiotic resistance gene transfer element derived from Vibrio cholerae

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892462

Mobile elements as a combination of functional modules.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892462

Ecological fitness, genomic islands and bacterial pathogenicity. A Darwinian view of the evolution of microbes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892462

Int-B13, an unusual site-specific recombinase of the bacteriophage P4 integrase family, is responsible for chromosomal insertion of the 105-kilobase clc element of Pseudomonas sp. Strain B13.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892462

Chromosomal integration, tandem amplification, and deamplification in Pseudomonas putida F1 of a 105-kilobase genetic element containing the chlorocatechol degradative genes from Pseudomonas sp. Strain B13.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892462

Dynamics of denitrification activity of Paracoccus denitrificans in continuous culture during aerobic-anaerobic changes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892462

Small RNA as global regulator of carbon catabolite repression in Pseudomonas aeruginosa

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892462

Intracellular excision and reintegration dynamics of the ICEclc genomic island of Pseudomonas knackmussii sp. strain B13

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892462

Transcript profiling of the Pseudomonas aeruginosa genomic islands PAGI-2 and pKLC102.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892462

Novel type IV secretion system involved in propagation of genomic islands

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892462

Mobile genetic elements: the agents of open source evolution

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892462

Transcriptional regulation of pWW0 transfer genes in Pseudomonas putida KT2440.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892462

SOS response promotes horizontal dissemination of antibiotic resistance genes

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892462

Genetic characterization of the styrene lower catabolic pathway of Pseudomonas sp. strain Y2.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892462

Transcriptome Complexity in a Genome-Reduced Bacterium

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2892462

Excision and transfer of the Mesorhizobium loti R7A symbiosis island requires an integrase IntS, a novel recombination directionality factor RdfS, and a putative relaxase RlxS

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20504315

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2180-10-153

1 reference

Dimensions Publication ID

28 July 2017

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1 reference

28 July 2017

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