(Q33617138)

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Double labeling of oligonucleotide probes for fluorescence in situ hybridization (DOPE-FISH) improves signal intensity and increases rRNA accessibility

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Double labeling of oligonucleotide probes for fluorescence in situ hybridization (DOPE-FISH) improves signal intensity and increases rRNA accessibility (English)

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

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object named as

Holger Daims

3

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object named as

Michael Wagner

4

0 references

Kilian Stoecker

1

object named as

Kilian Stoecker

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

author name string

Christiane Dorninger

2

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Europe PubMed Central

PubMed publication ID

28 July 2017

language of work or name

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publication date

4 December 2009

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Applied and Environmental Microbiology

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Europe PubMed Central

PubMed publication ID

28 July 2017

76

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Europe PubMed Central

PubMed publication ID

28 July 2017

3

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

922-926

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

Quantification of target molecules needed to detect microorganisms by fluorescence in situ hybridization (FISH) and catalyzed reporter deposition-FISH.

1 reference

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21 June 2018

Single-cell identification in microbial communities by improved fluorescence in situ hybridization techniques.

1 reference

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21 June 2018

SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813028

21 June 2018

probeBase--an online resource for rRNA-targeted oligonucleotide probes: new features 2007.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813028

21 June 2018

Cohn's Crenothrix is a filamentous methane oxidizer with an unusual methane monooxygenase

1 reference

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21 June 2018

daime, a novel image analysis program for microbial ecology and biofilm research

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813028

21 June 2018

Making all parts of the 16S rRNA of Escherichia coli accessible in situ to single DNA oligonucleotides.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813028

21 June 2018

Identification of Whole Fixed Bacterial Cells with Nonradioactive 23S rRNA-Targeted Polynucleotide Probes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813028

21 June 2018

Fluorescence in situ hybridisation for the identification and characterisation of prokaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813028

21 June 2018

In situ accessibility of small-subunit rRNA of members of the domains Bacteria, Archaea, and Eucarya to Cy3-labeled oligonucleotide probes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813028

21 June 2018

Fluorescence in situ hybridization of 16S rRNA gene clones (Clone-FISH) for probe validation and screening of clone libraries

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813028

21 June 2018

Fluorescence in situ hybridization and catalyzed reporter deposition for the identification of marine bacteria

1 reference

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21 June 2018

Comparison of fluorescently labeled oligonucleotide and polynucleotide probes for the detection of pelagic marine bacteria and archaea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813028

21 June 2018

In situ accessibility of Escherichia coli 23S rRNA to fluorescently labeled oligonucleotide probes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813028

21 June 2018

Fluorescence in situ hybridization (FISH) for direct visualization of microorganisms.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813028

21 June 2018

Unlabeled helper oligonucleotides increase the in situ accessibility to 16S rRNA of fluorescently labeled oligonucleotide probes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813028

21 June 2018

Visualization and enumeration of marine planktonic archaea and bacteria by using polyribonucleotide probes and fluorescent in situ hybridization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813028

21 June 2018

In situ identification of cyanobacteria with horseradish peroxidase-labeled, rRNA-targeted oligonucleotide probes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813028

21 June 2018

Flow cytometric analysis of the in situ accessibility of Escherichia coli 16S rRNA for fluorescently labeled oligonucleotide probes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813028

21 June 2018

Optimizing fluorescent in situ hybridization with rRNA‐targeted oligonucleotide probes for flow cytometric identification of microorganisms

1 reference

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21 June 2018

Phylogenetic stains: ribosomal RNA-based probes for the identification of single cells

1 reference

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21 June 2018

Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology

1 reference

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21 June 2018

Evaluation of enzymatic cell treatments for application of CARD-FISH to methanogens.

1 reference

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30 October 2018

Fluorescence in situ hybridization for the identification of environmental microbes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813028

30 October 2018

Effects of fluorescent dyes, quenchers, and dangling ends on DNA duplex stability.

1 reference

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30 October 2018

Interaction of cyanine dyes with nucleic acids. XXI. Arguments for half-intercalation model of interaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813028

30 October 2018

In situ detection of a virulence factor mRNA and 16S rRNA in Listeria monocytogenes

1 reference

https://pubmed.ncbi.nlm.nih.gov/19966029

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Quantitative imaging and statistical analysis of fluorescence in situ hybridization (FISH) of Aureobasidium pullulans

1 reference

https://pubmed.ncbi.nlm.nih.gov/19966029

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/AEM.02456-09

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

28 July 2017

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