(Q33617389)

28 July 2017

title

The complete genome of Blastobotrys (Arxula) adeninivorans LS3 - a yeast of biotechnological interest (English)

1 reference

28 July 2017

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whole genome sequencing

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Gotthard Kunze

1

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Claude Gaillardin

2

Claude Gaillardin

1 reference

28 July 2017

Tiphaine Martin

5

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Toni Gabaldón

7

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28 July 2017

10

Christian Marck

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28 July 2017

11

André Goffeau

1 reference

28 July 2017

12

Valérie Barbe

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Philippe Baret

Philippe Baret

13

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Keith Baronian

14

Keith Baronian

1 reference

28 July 2017

Sebastian Beier

15

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Cécile Fairhead

20

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28 July 2017

Martin Giersberg

21

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Claire Jubin

26

Claire Jubin

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Paul P Jung

Paul Jung

27

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Ingrid Lafontaine

28

1 reference

28 July 2017

Marina Marcet-Houben

31

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Martin Mascher

Martin Mascher

32

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Christine Sacerdot

Christine Sacerdot

36

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Anasua Sarkar

Anasua Sarkar

37

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David J. Sherman

David J Sherman

40

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Nils Stein

Nils Stein

41

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Eric Westhof

46

Eric Westhof

1 reference

28 July 2017

50

Patrick Wincker

1 reference

28 July 2017

Uwe Scholz

51

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Cécile Neuvéglise

52

Cécile Neuvéglise

1 reference

28 July 2017

9

Emmanuel Talla

1 reference

28 July 2017

Małgorzata Czernicka

3

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28 July 2017

Pascal Durrens

4

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28 July 2017

Erik Böer

6

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28 July 2017

Jose A Cruz

8

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28 July 2017

Claudine Bleykasten

16

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28 July 2017

Rüdiger Bode

17

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28 July 2017

Serge Casaregola

18

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28 July 2017

Laurence Despons

19

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28 July 2017

Przemysław Piotr Gierski

22

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28 July 2017

Urs Hähnel

23

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28 July 2017

Anja Hartmann

24

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28 July 2017

Dagmara Jankowska

25

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28 July 2017

Véronique Leh-Louis

29

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28 July 2017

Marc Lemaire

30

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28 July 2017

Guillaume Morel

33

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28 July 2017

Guy-Franck Richard

34

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28 July 2017

Jan Riechen

35

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28 July 2017

Guilhem Savel

38

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28 July 2017

Joseph Schacherer

39

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28 July 2017

Marie-Laure Straub

42

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28 July 2017

Agnès Thierry

43

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28 July 2017

Anke Trautwein-Schult

44

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28 July 2017

Benoit Vacherie

45

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28 July 2017

Sebastian Worch

47

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28 July 2017

Bernard Dujon

48

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28 July 2017

Jean-Luc Souciet

49

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28 July 2017

publication date

24 April 2014

1 reference

Biotechnology for Biofuels

28 July 2017

published in

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28 July 2017

volume

7

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28 July 2017

page(s)

66

1 reference

describes a project that uses

28 July 2017

limma

R package limma

2 references

22 June 2022

https://europepmc.org/article/PMC/4022394

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

MIRA

MIRA

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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The biochemistry of nitrogen mobilization: purine ring catabolism.

21 June 2018

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21 June 2018

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21 June 2018

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New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0

21 June 2018

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21 June 2018

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Conservation and divergence of centromere specification in yeast

21 June 2018

1 reference

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Insertion of horizontally transferred genes within conserved syntenic regions of yeast genomes

21 June 2018

1 reference

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21 June 2018

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Comparative genomics of protoploid Saccharomycetaceae

21 June 2018

1 reference

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trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

21 June 2018

1 reference

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The Sequence Alignment/Map format and SAMtools

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

Evolution of pathogenicity and sexual reproduction in eight Candida genomes

21 June 2018

1 reference

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Fast and accurate short read alignment with Burrows-Wheeler transform

21 June 2018

1 reference

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Génolevures: protein families and synteny among complete hemiascomycetous yeast proteomes and genomes

21 June 2018

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Large-scale assignment of orthology: back to phylogenetics?

21 June 2018

1 reference

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DIALIGN-TX: greedy and progressive approaches for segment-based multiple sequence alignment

21 June 2018

1 reference

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DupTree: a program for large-scale phylogenetic analyses using gene tree parsimony

21 June 2018

1 reference

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Microbial tannases: advances and perspectives

21 June 2018

1 reference

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Multigene phylogenetic analysis of the Trichomonascus, Wickerhamiella and Zygoascus yeast clades, and the proposal of Sugiyamaella gen. nov. and 14 new species combinations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

Linear models and empirical bayes methods for assessing differential expression in microarray experiments

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

The RNA polymerase III-dependent family of genes in hemiascomycetes: comparative RNomics, decoding strategies, transcription and evolutionary implications

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

M-Coffee: combining multiple sequence alignment methods with T-Coffee

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

New yeast expression platforms based on methylotrophic Hansenula polymorpha and Pichia pastoris and on dimorphic Arxula adeninivorans and Yarrowia lipolytica - a comparison

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

Tyl6, a novel Ty3/gypsy-like retrotransposon in the genome of the dimorphic fungus Yarrowia lipolytica.

21 June 2018

1 reference

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MAFFT version 5: improvement in accuracy of multiple sequence alignment

21 June 2018

1 reference

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MUSCLE: a multiple sequence alignment method with reduced time and space complexity

21 June 2018

1 reference

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Improved prediction of signal peptides: SignalP 3.0

21 June 2018

1 reference

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Versatile and open software for comparing large genomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

Microbial degradation of tannins--a current perspective

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

Production and application of tannin acyl hydrolase: state of the art.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

BIONJ: an improved version of the NJ algorithm based on a simple model of sequence data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

The YNT1 gene encoding the nitrate transporter in the yeast Hansenula polymorpha is clustered with genes YNI1 and YNR1 encoding nitrite reductase and nitrate reductase, and its disruption causes inability to grow in nitrate

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

Identification of a group-I intron within the 25S rDNA from the yeast Arxula adeninivorans

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

Catabolism of benzene compounds by ascomycetous and basidiomycetous yeasts and yeastlike fungi. A literature review and an experimental approach

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

Trichosporon adeninovorans sp. nov., a yeast species utilizing adenine, xanthine, uric acid, putrescine and primary n-alkylamines as the sole source of carbon, nitrogen and energy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

Arxula gen. nov. (Candidaceae), a new anamorphic, arthroconidial yeast genus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

Transfer RNA genes are genomic targets for de Novo transposition of the yeast retrotransposon Ty3

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

Data analysis by statistical models

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

Arxula adeninivorans recombinant adenine deaminase and its application in the production of food with low purine content.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

Arxula adeninivorans xanthine oxidoreductase and its application in the production of food with low purine content.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

Assigning duplication events to relative temporal scales in genome-wide studies

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

Novel metabolic routes during the oxidation of hydroxylated aromatic acids by the yeast Arxula adeninivorans

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

Atan1p-an extracellular tannase from the dimorphic yeast Arxula adeninivorans: molecular cloning of the ATAN1 gene and characterization of the recombinant enzyme.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

Characterization and expression analysis of a gene cluster for nitrate assimilation from the yeast Arxula adeninivorans.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

An extracellular lipase from the dimorphic yeast Arxula adeninivorans: molecular cloning of the ALIP1 gene and characterization of the purified recombinant enzyme.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

Acquisition of prokaryotic genes by fungal genomes

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4022394

Characterization of Arxula adeninivorans strains from different habitats

30 October 2018

1 reference

12 December 2020

Production of a thermostable alcohol dehydrogenase from Rhodococcus ruber in three different yeast species using the Xplor®2 transformation/expression platform

1 reference

12 December 2020

A novel estrogen sensor based on recombinant Arxula adeninivorans cells

1 reference

12 December 2020

Continuous anaerobic treatment of autoxidized bark extracts in laboratory-scale columns

1 reference

12 December 2020

The yeast genus Trichosporon spec. LS3;molecular characterization of genomic complexity

1 reference

12 December 2020

Large-scale production of tannase using the yeast Arxula adeninivorans

1 reference

12 December 2020

Degradation of some phenols and hydroxybenzoates by the imperfect ascomycetous yeasts Candida parapsilosis and Arxula adeninivorans: evidence for an operative gentisate pathway

1 reference

12 December 2020

Arxula adeninivorans, a yeast assimilating many nitrogenous and aromatic compounds

1 reference

12 December 2020

Heads or tails: a simple reliability check for multiple sequence alignments

1 reference

12 December 2020

The genome of wine yeast Dekkera bruxellensis provides a tool to explore its food-related properties

1 reference

12 December 2020

Evaluation and validation of a novel Arxula adeninivorans estrogen screen (nAES) assay and its application in analysis of wastewater, seawater, brackish water and urine

1 reference

12 December 2020

Characterisation of yeast microbial fuel cell with the yeast Arxula adeninivorans as the biocatalyst

1 reference

12 December 2020

Completing the purine utilisation pathway of Aspergillus nidulans

1 reference

12 December 2020

Identifiers

DOI

10.1186/1754-6834-7-66

1 reference

Dimensions Publication ID

28 July 2017

1 reference

https://scigraph.springernature.com/pub.10.1186/1754-6834-7-66

9 September 2019

1 reference

28 July 2017

1 reference