(Q33619783)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28457232%20AND%20SRC:MED&resulttype=core&format=json

19 March 2020

title

The evolution of CHROMOMETHYLASES and gene body DNA methylation in plants (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28457232%20AND%20SRC:MED&resulttype=core&format=json

19 March 2020

0 references

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28457232%20AND%20SRC:MED&resulttype=core&format=json

19 March 2020

Jim Leebens-Mack

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28457232%20AND%20SRC:MED&resulttype=core&format=json

19 March 2020

Robert Schmitz

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28457232%20AND%20SRC:MED&resulttype=core&format=json

19 March 2020

author name string

Adam J Bewick

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28457232%20AND%20SRC:MED&resulttype=core&format=json

19 March 2020

Lexiang Ji

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28457232%20AND%20SRC:MED&resulttype=core&format=json

19 March 2020

Nicholas A Rohr

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28457232%20AND%20SRC:MED&resulttype=core&format=json

19 March 2020

Patrick T Griffin

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28457232%20AND%20SRC:MED&resulttype=core&format=json

19 March 2020

publication date

1 May 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28457232%20AND%20SRC:MED&resulttype=core&format=json

19 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28457232%20AND%20SRC:MED&resulttype=core&format=json

19 March 2020

volume

18

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28457232%20AND%20SRC:MED&resulttype=core&format=json

19 March 2020

issue

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28457232%20AND%20SRC:MED&resulttype=core&format=json

19 March 2020

page(s)

65

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28457232%20AND%20SRC:MED&resulttype=core&format=json

https://scigraph.springernature.com/pub.10.1186/s13059-017-1195-1

19 March 2020

exact match

0 references

cites work

Widespread natural variation of DNA methylation within angiosperms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

On the origin and evolutionary consequences of gene body DNA methylation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Synthesis of phylogeny and taxonomy into a comprehensive tree of life

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

DNA methylation pathways and their crosstalk with histone methylation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Human body epigenome maps reveal noncanonical DNA methylation variation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

21 June 2018

Epigenetics in the wild

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

DNA methylation in Arabidopsis has a genetic basis and shows evidence of local adaptation.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Developmental- and Tissue-Specific Expression of NbCMT3-2 Encoding a Chromomethylase in Nicotiana benthamiana

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

MethylC-seq library preparation for base-resolution whole-genome bisulfite sequencing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

PASTA: Ultra-Large Multiple Sequence Alignment for Nucleotide and Amino-Acid Sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Natural CMT2 variation is associated with genome-wide methylation changes and temperature seasonality

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Phylotranscriptomic analysis of the origin and early diversification of land plants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Mechanism of DNA Methylation-Directed Histone Methylation by KRYPTONITE

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Genomic survey, gene expression analysis and structural modeling suggest diverse roles of DNA methyltransferases in legumes.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

SRA- and SET-domain-containing proteins link RNA polymerase V occupancy to DNA methylation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

InterProScan 5: genome-scale protein function classification

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Non-CG methylation patterns shape the epigenetic landscape in Arabidopsis.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

The Arabidopsis nucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Gene body methylation is conserved between plant orthologs and is of evolutionary consequence

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Comprehensive analysis of silencing mutants reveals complex regulation of the Arabidopsis methylome.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Dual Binding of Chromomethylase Domains to H3K9me2-Containing Nucleosomes Directs DNA Methylation in Plants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Ancestral polyploidy in seed plants and angiosperms

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Early Middle Ordovician evidence for land plants in Argentina (eastern Gondwana)

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Conservation and divergence of methylation patterning in plants and animals

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Genome-wide evolutionary analysis of eukaryotic DNA methylation.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Origin and radiation of the earliest vascular land plants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

The rules of gene expression in plants: organ identity and gene body methylation are key factors for regulation of gene expression in Arabidopsis thaliana

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

PAML 4: phylogenetic analysis by maximum likelihood

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Distinct mechanisms determine transposon inheritance and methylation via small interfering RNA and histone modification

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Fragments of the earliest land plants

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Maize chromomethylase Zea methyltransferase2 is required for CpNpG methylation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Arabidopsis cmt3 chromomethylase mutations block non-CG methylation and silencing of an endogenous gene

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

The evolutionary fate and consequences of duplicate genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Plant DNA methyltransferases.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Targeted screening for induced mutations

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

A DNA methyltransferase homolog with a chromodomain exists in multiple polymorphic forms in Arabidopsis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

The origin of red algae: implications for plastid evolution

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

Genetic perturbation of the maize methylome

21 June 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-017-1195-1

A single CMT methyltransferase homolog is involved in CHG DNA methylation and development of Physcomitrella patens.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-017-1195-1

DNA methylation profiling identifies CG methylation clusters in Arabidopsis genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-017-1195-1

Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-017-1195-1

Body-methylated genes in Arabidopsis thaliana are functionally important and evolve slowly.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-017-1195-1

The origin and early evolution of plants on land

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-017-1195-1

Algal Phylogeny and the Origin of Land Plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-017-1195-1

Role of DNA methylation in growth and differentiation in Physcomitrella patens and characterization of cytosine DNA methyltransferases.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-017-1195-1

Evolutionary patterns of genic DNA methylation vary across land plants.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-017-1195-1

Rice SUVH histone methyltransferase genes display specific functions in chromatin modification and retrotransposon repression

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13059-017-1195-1

Functional characterization of Nicotiana benthamiana chromomethylase 3 in developmental programs by virus-induced gene silencing

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5410703

What triggers differential DNA methylation of genes and TEs: contribution of body methylation?

30 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28457232

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/S13059-017-1195-1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28457232%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

19 March 2020

1084612568

0 references

Fatcat ID

release_4ibjdhfsxbeejhzis62yvd543e

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/4ibjdhfsxbeejhzis62yvd543e

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28457232%20AND%20SRC:MED&resulttype=core&format=json

19 March 2020

PubMed publication ID

28457232

1 reference