Home
Random
Nearby
Log in
Settings
Donate
About Wikidata
Disclaimers
Search
(Q33624142)
Watch
English
Orthology confers intron position conservation
scientific article
In more languages
edit
Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PubMed ID
20598118
retrieved
28 July 2017
title
Orthology confers intron position conservation
(English)
1 reference
stated in
Europe PubMed Central
PubMed ID
20598118
retrieved
28 July 2017
author
Sofia K. Forslund
series ordinal
2
1 reference
stated in
Europe PubMed Central
PubMed ID
20598118
retrieved
28 July 2017
Erik Sonnhammer
series ordinal
3
object named as
Erik L L Sonnhammer
1 reference
stated in
Europe PubMed Central
PubMed ID
20598118
retrieved
28 July 2017
author name string
Anna Henricson
series ordinal
1
1 reference
stated in
Europe PubMed Central
PubMed ID
20598118
retrieved
28 July 2017
language of work or name
English
0 references
publication date
2 July 2010
1 reference
stated in
Europe PubMed Central
PubMed ID
20598118
retrieved
28 July 2017
published in
BMC Genomics
1 reference
stated in
Europe PubMed Central
PubMed ID
20598118
retrieved
28 July 2017
volume
11
1 reference
stated in
Europe PubMed Central
PubMed ID
20598118
retrieved
28 July 2017
page(s)
412
1 reference
stated in
Europe PubMed Central
PubMed ID
20598118
retrieved
28 July 2017
exact match
https://scigraph.springernature.com/pub.10.1186/1471-2164-11-412
0 references
cites work
The Pfam protein families database
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Ensembl's 10th year
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Phylogenetic and functional assessment of orthologs inference projects and methods
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Kalign2: high-performance multiple alignment of protein and nucleotide sequences allowing external features
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Algorithm of OMA for large-scale orthology inference
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Exalign: a new method for comparative analysis of exon-intron gene structures
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
eggNOG: automated construction and annotation of orthologous groups of genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Patterns of intron gain and conservation in eukaryotic genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Three distinct modes of intron dynamics in the evolution of eukaryotes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Assessing performance of orthology detection strategies applied to eukaryotic genomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Database resources of the National Center for Biotechnology Information
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Ensembl 2007
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Benchmarking ortholog identification methods using functional genomics data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Rates of intron loss and gain: implications for early eukaryotic evolution
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Conservation versus parallel gains in intron evolution
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Evolutionary diversity of vertebrate small heat shock proteins.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Reconstruction of ancestral protosplice sites
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Prevalence of intron gain over intron loss in the evolution of paralogous gene families
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
The COG database: an updated version includes eukaryotes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Remarkable interkingdom conservation of intron positions and massive, lineage-specific intron loss and gain in eukaryotic evolution
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Large-scale comparison of intron positions in mammalian genes shows intron loss but no gain
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Eukaryotic intron loss
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Large-scale comparison of intron positions among animal, plant, and fungal genes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Automatic clustering of orthologs and in-paralogs from pairwise species comparisons
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Intron sliding in conserved gene families.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Gene ontology: tool for the unification of biology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
The large srh family of chemoreceptor genes in Caenorhabditis nematodes reveals processes of genome evolution involving large duplications and deletions and intron gains and losses
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
The use of gene clusters to infer functional coupling
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Two large families of chemoreceptor genes in the nematodes Caenorhabditis elegans and Caenorhabditis briggsae reveal extensive gene duplication, diversification, movement, and intron loss
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Intron "sliding" and the diversity of intron positions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Distinguishing Homologous from Analogous Proteins
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Evidence that introns arose at proto-splice sites.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
Proto-splice site model of intron origin.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
14 July 2018
On the incidence of intron loss and gain in paralogous gene families.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
30 October 2018
Systematic identification of functional orthologs based on protein network comparison
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
30 October 2018
Exon junction sequences as cryptic splice sites: implications for intron origin.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
30 October 2018
The evolutionary gain of spliceosomal introns: sequence and phase preferences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2996940
retrieved
30 October 2018
The amphioxus Hox cluster: deuterostome posterior flexibility and Hox14
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/20598118
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Orthology, paralogy and proposed classification for paralog subtypes
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/20598118
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1186/1471-2164-11-412
1 reference
stated in
Europe PubMed Central
PubMed ID
20598118
retrieved
28 July 2017
Dimensions Publication ID
1000294750
1 reference
stated in
SciGraph
reference URL
https://scigraph.springernature.com/pub.10.1186/1471-2164-11-412
retrieved
9 September 2019
PMCID
2996940
1 reference
stated in
Europe PubMed Central
PubMed ID
20598118
retrieved
28 July 2017
PubMed ID
20598118
1 reference
stated in
Europe PubMed Central
PubMed ID
20598118
retrieved
28 July 2017
ResearchGate publication ID
45089259
0 references
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit