(Q33657733)

28 July 2017

title

Tissue-specific SMARCA4 binding at active and repressed regulatory elements during embryogenesis (English)

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28 July 2017

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6

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28 July 2017

1

Catia Attanasio

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28 July 2017

Simon C Biddie

5

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Matthew Blow

Matthew J Blow

4

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Alex S Nord

Alex S Nord

2

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Axel Visel

Axel Visel

18

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Edward M. Rubin

17

Edward M Rubin

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28 July 2017

16

Bradley E Bernstein

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28 July 2017

19

Len A Pennacchio

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28 July 2017

13

Malak Shoukry

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28 July 2017

12

Ingrid Plajzer-Frick

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28 July 2017

10

Jennifer A Akiyama

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28 July 2017

11

Amy Holt

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28 July 2017

14

Veena Afzal

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28 July 2017

Yiwen Zhu

3

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28 July 2017

Jesse Dixon

7

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28 July 2017

Crystal Wright

8

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28 July 2017

Roya Hosseini

9

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28 July 2017

Bing Ren

15

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28 July 2017

publication date

21 April 2014

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28 July 2017

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28 July 2017

volume

24

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28 July 2017

issue

6

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28 July 2017

page(s)

920-929

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Rapid and pervasive changes in genome-wide enhancer usage during mammalian development

28 July 2017

cites work

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21 June 2018

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Novel mutations target distinct subgroups of medulloblastoma.

21 June 2018

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Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

21 June 2018

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UTX, a histone H3-lysine 27 demethylase, acts as a critical switch to activate the cardiac developmental program

21 June 2018

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Regulation of nucleosome landscape and transcription factor targeting at tissue-specific enhancers by BRG1

21 June 2018

1 reference

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Dual role of Brg chromatin remodeling factor in Sonic hedgehog signaling during neural development

21 June 2018

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21 June 2018

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SWI/SNF complexes containing Brahma or Brahma-related gene 1 play distinct roles in smooth muscle development

21 June 2018

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Diverse roles and interactions of the SWI/SNF chromatin remodeling complex revealed using global approaches

21 June 2018

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Chromatin remodelling complex dosage modulates transcription factor function in heart development

21 June 2018

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Dynamic BRG1 recruitment during T helper differentiation and activation reveals distal regulatory elements

21 June 2018

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A unique chromatin signature uncovers early developmental enhancers in humans

21 June 2018

1 reference

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ChIP-Seq identification of weakly conserved heart enhancers

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

Chromatin regulation by Brg1 underlies heart muscle development and disease

21 June 2018

1 reference

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GREAT improves functional interpretation of cis-regulatory regions

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

Germline nonsense mutation and somatic inactivation of SMARCA4/BRG1 in a family with rhabdoid tumor predisposition syndrome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

Chromatin remodelling during development

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

BEDTools: a flexible suite of utilities for comparing genomic features

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

Predictive chromatin signatures in the mammalian genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

BRG1 directly regulates nucleosome structure and chromatin looping of the alpha globin locus to activate transcription

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

Fast and accurate short read alignment with Burrows-Wheeler transform

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

An embryonic stem cell chromatin remodeling complex, esBAF, is essential for embryonic stem cell self-renewal and pluripotency

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

ChIP-seq accurately predicts tissue-specific activity of enhancers

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

Model-based analysis of ChIP-Seq (MACS)

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

Whole-genome mapping of histone H3 Lys4 and 27 trimethylations reveals distinct genomic compartments in human embryonic stem cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

Endocardial Brg1 represses ADAMTS1 to maintain the microenvironment for myocardial morphogenesis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

ChIP-chip for genome-wide analysis of protein binding in mammalian cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

The chromatin-remodeling enzyme BRG1 plays an essential role in primitive erythropoiesis and vascular development

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

Deletion of ultraconserved elements yields viable mice

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

VISTA Enhancer Browser--a database of tissue-specific human enhancers

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

In vivo enhancer analysis of human conserved non-coding sequences

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

Role of Brg1 and HDAC2 in GR trans-repression of the pituitary POMC gene and misexpression in Cushing disease.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

Chromatin remodelling: the industrial revolution of DNA around histones

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

Chromatin remodelling in mammalian differentiation: lessons from ATP-dependent remodellers

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

A bivalent chromatin structure marks key developmental genes in embryonic stem cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

A Brg1 mutation that uncouples ATPase activity from chromatin remodeling reveals an essential role for SWI/SNF-related complexes in beta-globin expression and erythroid development

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

The SWI/SNF chromatin remodeling protein Brg1 is required for vertebrate neurogenesis and mediates transactivation of Ngn and NeuroD.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

p38 pathway targets SWI-SNF chromatin-remodeling complex to muscle-specific loci

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

Function and selectivity of bromodomains in anchoring chromatin-modifying complexes to promoter nucleosomes.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

REST repression of neuronal genes requires components of the hSWI.SNF complex

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

Cell cycle arrest and repression of cyclin D1 transcription by INI1/hSNF5.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

Reciprocal regulation of CD4/CD8 expression by SWI/SNF-like BAF complexes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

A Brg1 null mutation in the mouse reveals functional differences among mammalian SWI/SNF complexes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

Characterization of SWI/SNF protein expression in human breast cancer cell lines and other malignancies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

Rapid and phosphoinositol-dependent binding of the SWI/SNF-like BAF complex to chromatin after T lymphocyte receptor signaling

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

A transgene containing lacZ inserted into the dystonia locus is expressed in neural tube.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

SWI/SNF-Brg1 regulates self-renewal and occupies core pluripotency-related genes in embryonic stem cells.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

Whole-genome analysis of histone H3 lysine 4 and lysine 27 methylation in human embryonic stem cells

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

Polybromo-1-bromodomains bind histone H3 at specific acetyl-lysine positions.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4032856

30 October 2018

Identifiers

DOI

10.1101/GR.168930.113

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28 July 2017

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28 July 2017

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