(Q33662531)

28 July 2017

title

Clustering of protein families into functional subtypes using Relative Complexity Measure with reduced amino acid alphabets (English)

1 reference

28 July 2017

Hasan H Otu

2

1 reference

ORCID Public Data File 2021

author name string

Aydin Albayrak

series ordinal

1

1 reference

28 July 2017

Ugur O Sezerman

series ordinal

3

1 reference

28 July 2017

publication date

18 August 2010

1 reference

28 July 2017

1 reference

28 July 2017

volume

11

1 reference

28 July 2017

page(s)

428

1 reference

Partially-supervised protein subclass discovery with simultaneous annotation of functional residues

28 July 2017

cites work

1 reference

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21 June 2018

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21 June 2018

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Reduced amino acid alphabets exhibit an improved sensitivity and selectivity in fold assignment

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Divergent evolution of enzymatic function: mechanistically diverse superfamilies and functionally distinct suprafamilies

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Theory for the folding and stability of globular proteins

21 June 2018

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The neighbor-joining method: a new method for reconstructing phylogenetic trees

21 June 2018

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A reduced amino acid alphabet for understanding and designing protein adaptation to mutation.

21 June 2018

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Protein-based phylogenetic analysis by using hydropathy profile of amino acids.

30 October 2018

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Utilization of the relative complexity measure to construct a phylogenetic tree for fungi

30 October 2018

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30 October 2018

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Analysis and prediction of functional sub-types from protein sequence alignments.

30 October 2018

1 reference

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Simplified amino acid alphabets for protein fold recognition and implications for folding.

30 October 2018

1 reference

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A computational approach to simplifying the protein folding alphabet.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936399

Analysis of peptides from known proteins: clusterization in sequence space.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2936399

Optimized representations and maximal information in proteins

30 October 2018

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12 December 2020

Structure-derived substitution matrices for alignment of distantly related sequences

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12 December 2020

Secator: a program for inferring protein subfamilies from phylogenetic trees

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12 December 2020

Reduction of protein sequence complexity by residue grouping

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2105-11-428

1 reference

journals/bmcbi/AlbayrakOS10

28 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

0 references

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28 July 2017

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