(Q33688009)

28 July 2017

title

The archaeal Lsm protein binds to small RNAs (English)

1 reference

28 July 2017

8

Henning Urlaub

1 reference

28 July 2017

Susan Fischer

1

1 reference

28 July 2017

Juliane Benz

2

1 reference

28 July 2017

Bettina Späth

3

1 reference

28 July 2017

Lisa-Katharina Maier

4

1 reference

28 July 2017

Julia Straub

5

1 reference

28 July 2017

Michaela Granzow

6

1 reference

28 July 2017

Monika Raabe

7

1 reference

28 July 2017

Jan Hoffmann

9

1 reference

28 July 2017

Bernd Brutschy

10

1 reference

28 July 2017

Thorsten Allers

11

1 reference

28 July 2017

Jörg Soppa

12

1 reference

28 July 2017

Anita Marchfelder

13

1 reference

28 July 2017

language of work or name

English

0 references

publication date

7 September 2010

1 reference

Journal of Biological Chemistry

28 July 2017

published in

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28 July 2017

volume

285

1 reference

28 July 2017

issue

45

1 reference

28 July 2017

page(s)

34429-34438

1 reference

describes a project that uses

28 July 2017

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC2966057/fullTextXML

inferred from PubMed Central ID database lookup

cites work

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The RNA binding protein Hfq interacts specifically with tRNAs.

21 June 2018

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The post-transcriptional regulator CsrA plays a central role in the adaptation of bacterial pathogens to different stages of infection in animal hosts

21 June 2018

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Experimental characterization of Cis-acting elements important for translation and transcription in halophilic archaea

21 June 2018

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An Hfq-like protein in archaea: Crystal structure and functional characterization of the Sm protein from Methanococcus jannaschii

21 June 2018

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21 June 2018

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The RNA chaperone Hfq is essential for the virulence of Salmonella typhimurium

21 June 2018

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Induction of expression of hfq by DksA is essential for Shigella flexneri virulence

21 June 2018

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21 June 2018

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LSm proteins form heptameric rings that bind to RNA via repeating motifs

21 June 2018

1 reference

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Interaction network containing conserved and essential protein complexes in Escherichia coli

21 June 2018

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21 June 2018

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The RNA-binding protein Hfq of Listeria monocytogenes: role in stress tolerance and virulence

21 June 2018

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The bacterial Sm-like protein Hfq: a key player in RNA transactions

21 June 2018

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Development of additional selectable markers for the halophilic archaeon Haloferax volcanii based on the leuB and trpA genes

21 June 2018

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Global analysis of small RNA and mRNA targets of Hfq

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Reduced virulence of a hfq mutant of Pseudomonas aeruginosa O1

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Sm-like proteins in Eubacteria: the crystal structure of the Hfq protein from Escherichia coli

21 June 2018

1 reference

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Construction and usage of a onefold-coverage shotgun DNA microarray to characterize the metabolism of the archaeon Haloferax volcanii.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Structure and assembly of an augmented Sm-like archaeal protein 14-mer

21 June 2018

1 reference

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The oligomerization and ligand-binding properties of Sm-like archaeal proteins (SmAPs)

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Development of a gene knockout system for the halophilic archaeon Haloferax volcanii by use of the pyrE gene

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Crystal structures of the Pyrococcus abyssi Sm core and its complex with RNA. Common features of RNA binding in archaea and eukarya

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Cell cycle-dependent expression of an essential SMC-like protein and dynamic chromosome localization in the archaeon Halobacterium salinarum

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Predicted structure and phyletic distribution of the RNA-binding protein Hfq.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Spot 42 RNA mediates discoordinate expression of the E. coli galactose operon

21 June 2018

1 reference

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Structures of the pleiotropic translational regulator Hfq and an Hfq-RNA complex: a bacterial Sm-like protein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Archaeal Sm proteins form heptameric and hexameric complexes: crystal structures of the Sm1 and Sm2 proteins from the hyperthermophile Archaeoglobus fulgidus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Lsm proteins are required for normal processing of pre-tRNAs and their efficient association with La-homologous protein Lhp1p

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

In vitro reconstitution and activity of a C/D box methylation guide ribonucleoprotein complex

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coli

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Hfq: a bacterial Sm-like protein that mediates RNA-RNA interaction

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

The Sm-like Hfq protein increases OxyS RNA interaction with target mRNAs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Identification of novel small RNAs using comparative genomics and microarrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Crystal structure of a heptameric Sm-like protein complex from archaea: implications for the structure and evolution of snRNPs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

The crystal structure of a heptameric archaeal Sm protein: Implications for the eukaryotic snRNP core

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

RNA binding in an Sm core domain: X-ray structure and functional analysis of an archaeal Sm protein complex

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

The Sm domain is an ancient RNA-binding motif with oligo(U) specificity

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Hfq is necessary for regulation by the untranslated RNA DsrA

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Homologs of small nucleolar RNAs in Archaea

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Yeast Sm-like proteins function in mRNA decapping and decay

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

A Sm-like protein complex that participates in mRNA degradation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

A doughnut-shaped heteromer of human Sm-like proteins binds to the 3'-end of U6 snRNA, thereby facilitating U4/U6 duplex formation in vitro

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Characterization of Sm-like proteins in yeast and their association with U6 snRNA

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Sm and Sm-like proteins assemble in two related complexes of deep evolutionary origin

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

A role for the yeast La protein in U6 snRNP assembly: evidence that the La protein is a molecular chaperone for RNA polymerase III transcripts

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

The OxyS regulatory RNA represses rpoS translation and binds the Hfq (HF-I) protein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

5' end maturation and RNA editing have to precede tRNA 3' processing in plant mitochondria

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Complete genome sequence of Methanobacterium thermoautotrophicum deltaH: functional analysis and comparative genomics

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

The RNA-binding protein HF-I plays a global regulatory role which is largely, but not exclusively, due to its role in expression of the sigmaS subunit of RNA polymerase in Escherichia coli

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Mass Spectrometric Sequencing of Proteins from Silver-Stained Polyacrylamide Gels

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Conserved sequence elements involved in regulation of ribosomal protein gene expression in halophilic archaea

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Efficient translation of the RpoS sigma factor in Salmonella typhimurium requires host factor I, an RNA-binding protein encoded by the hfq gene

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

The RNA-binding protein HF-I, known as a host factor for phage Qbeta RNA replication, is essential for rpoS translation in Escherichia coli

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Characterization of broadly pleiotropic phenotypes caused by an hfq insertion mutation in Escherichia coli K-12.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Transfer RNA editing in land snail mitochondria

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Archaebacterial DNA-dependent RNA polymerases testify to the evolution of the eukaryotic nuclear genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Single-Step Method of RNA Isolation by Acid Guanidinium Thiocyanate–Phenol–Chloroform Extraction

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Site-specific interaction of Qbeta host factor and ribosomal protein S1 with Qbeta and R17 bacteriophage RNAs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966057

Small RNAs of the halophilic archaeon Haloferax volcanii

21 June 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.118950

Characterization of a tightly controlled promoter of the halophilic archaeon Haloferax volcanii and its use in the analysis of the essential cct1 gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.118950

Maturation of the 5S rRNA 5' end is catalyzed in vitro by the endonuclease tRNase Z in the archaeon H. volcanii

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.118950

Analysis of the functional modules of the tRNA 3' endonuclease (tRNase Z).

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.118950

Hfq is essential for Vibrio cholerae virulence and downregulates sigma expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.118950

The Brucella abortus host factor I (HF-I) protein contributes to stress resistance during stationary phase and is a major determinant of virulence in mice

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.118950

A novel approach to analyze membrane proteins by laser mass spectrometry: From protein subunits to the integral complex

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20826804

12 December 2020

inferred from PubMed ID database lookup

Twelve species of the nucleoid-associated protein from Escherichia coli. Sequence recognition specificity and DNA binding affinity

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20826804

12 December 2020

inferred from PubMed ID database lookup

Interaction of Escherichia coli host factor protein with Q.beta. ribonucleic acid

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20826804

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1074/JBC.M110.118950

1 reference

28 July 2017

1 reference

28 July 2017

1 reference