(Q33689805)

English

Combined statistical analyses of peptide intensities and peptide occurrences improves identification of significant peptides from MS-based proteomics data

scientific article

In more languages

Statements

scholarly article

1 reference

Europe PubMed Central

28 July 2017

Combined statistical analyses of peptide intensities and peptide occurrences improves identification of significant peptides from MS-based proteomics data (English)

1 reference

Europe PubMed Central

28 July 2017

0 references

object named as

Lee Ann McCue

2

0 references

object named as

Thomas O Metz

6

0 references

object named as

Joel G Pounds

8

0 references

Katrina M. Waters

object named as

Katrina M Waters

3

0 references

Melissa M Matzke

4

object named as

Melissa M Matzke

1 reference

Europe PubMed Central

28 July 2017

Jöns Jacob Berzelius

5

object named as

Jon M Jacobs

1 reference

Europe PubMed Central

28 July 2017

Bobbie-Jo Webb-Robertson

1

object named as

Bobbie-Jo M Webb-Robertson

1 reference

Europe PubMed Central

28 July 2017

7

object named as

Susan M Varnum

1 reference

Europe PubMed Central

28 July 2017

language of work or name

1 reference

based on heuristic

inferred from title

publication date

8 October 2010

1 reference

Europe PubMed Central

28 July 2017

Journal of Proteome Research

1 reference

Europe PubMed Central

28 July 2017

9

1 reference

Europe PubMed Central

28 July 2017

11

1 reference

Europe PubMed Central

28 July 2017

5748-5756

1 reference

Europe PubMed Central

28 July 2017

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2974810

21 June 2018

Comparative analysis of missing value imputation methods to improve clustering and interpretation of microarray experiments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2974810

21 June 2018

Dealing with missing values in large-scale studies: microarray data imputation and beyond.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2974810

21 June 2018

VIBE 2.0: visual integration for bayesian evaluation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2974810

21 June 2018

A statistical framework for protein quantitation in bottom-up MS-based proteomics.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2974810

21 June 2018

Decon2LS: An open-source software package for automated processing and visualization of high resolution mass spectrometry data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2974810

21 June 2018

A Bayesian integration model of high-throughput proteomics and metabolomics data for improved early detection of microbial infections.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2974810

21 June 2018

An assessment of false discovery rates and statistical significance in label-free quantitative proteomics with combined filters

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2974810

21 June 2018

Corra: Computational framework and tools for LC-MS discovery and targeted mass spectrometry-based proteomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2974810

21 June 2018

Identification of estrogen-responsive proteins in MCF-7 human breast cancer cells using label-free quantitative proteomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2974810

21 June 2018

DAnTE: a statistical tool for quantitative analysis of -omics data.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2974810

21 June 2018

Application of proteomics in the discovery of candidate protein biomarkers in a diabetes autoantibody standardization program sample subset.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2974810

21 June 2018

Statistical similarities between transcriptomics and quantitative shotgun proteomics data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2974810

21 June 2018

VIPER: an advanced software package to support high-throughput LC-MS peptide identification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2974810

21 June 2018

Integrative missing value estimation for microarray data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2974810

21 June 2018

Label-free protein quantification using LC-coupled ion trap or FT mass spectrometry: Reproducibility, linearity, and application with complex proteomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2974810

21 June 2018

Estimating probabilities of peptide database identifications to LC-FTICR-MS observations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2974810

21 June 2018

PRISM: a data management system for high-throughput proteomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2974810

21 June 2018

Comparison of probability and likelihood models for peptide identification from tandem mass spectrometry data.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2974810

21 June 2018

A statistical model for identifying proteins by tandem mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2974810

21 June 2018

ProbID: a probabilistic algorithm to identify peptides through sequence database searching using tandem mass spectral data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2974810

21 June 2018

SCOPE: a probabilistic model for scoring tandem mass spectra against a peptide database.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2974810

21 June 2018

Missing value estimation methods for DNA microarrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2974810

21 June 2018

More powerful procedures for multiple significance testing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2974810

21 June 2018

Mixed-Effects Statistical Model for Comparative LC−MS Proteomics Studies†

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2974810

30 October 2018

An accurate mass tag strategy for quantitative and high-throughput proteome measurements

1 reference

https://pubmed.ncbi.nlm.nih.gov/20831241

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1021/PR1005247

1 reference

Europe PubMed Central

28 July 2017

release_kdljjixaxfb2rgdny47ibwvw4e

1 reference

https://api.fatcat.wiki/v0/release/kdljjixaxfb2rgdny47ibwvw4e

24 November 2022

based on heuristic

mapped directly with Wikidata item

1 reference

Europe PubMed Central

28 July 2017

1 reference

Europe PubMed Central

28 July 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q33689805&oldid=1857935593"