(Q33690514)

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Sources of error inherent in species-tree estimation: impact of mutational and coalescent effects on accuracy and implications for choosing among different methods

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scholarly article

1 reference

Europe PubMed Central

28 July 2017

Sources of error inherent in species-tree estimation: impact of mutational and coalescent effects on accuracy and implications for choosing among different methods (English)

1 reference

Europe PubMed Central

28 July 2017

Laura S Kubatko

3

object named as

Laura S Kubatko

1 reference

Europe PubMed Central

28 July 2017

4

object named as

L Lacey Knowles

1 reference

Europe PubMed Central

28 July 2017

author name string

Huateng Huang

1

1 reference

Europe PubMed Central

28 July 2017

Qixin He

2

1 reference

Europe PubMed Central

28 July 2017

publication date

10 September 2010

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Europe PubMed Central

28 July 2017

Systematic Biology

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Europe PubMed Central

28 July 2017

59

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Europe PubMed Central

28 July 2017

5

1 reference

Europe PubMed Central

28 July 2017

573-583

1 reference

Europe PubMed Central

28 July 2017

Bayesian estimation of concordance among gene trees.

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

Comparison of species tree methods for reconstructing the phylogeny of bearded manakins (Aves: Pipridae, Manacus) from multilocus sequence data

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

Estimating species phylogeny from gene-tree probabilities despite incomplete lineage sorting: an example from Melanoplus grasshoppers

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

Species trees from highly incongruent gene trees in rice.

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

Discordance of species trees with their most likely gene trees.

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

Gene tree discordance, phylogenetic inference and the multispecies coalescent

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

Does gene flow destroy phylogenetic signal? The performance of three methods for estimating species phylogenies in the presence of gene flow

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

Is a new and general theory of molecular systematics emerging?

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

High-resolution species trees without concatenation

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

Success of maximum likelihood phylogeny inference in the four-taxon case

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

Gene discovery using massively parallel pyrosequencing to develop ESTs for the flesh fly Sarcophaga crassipalpis.

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

Dating of the human-ape splitting by a molecular clock of mitochondrial DNA

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

Genomic relationships and speciation times of human, chimpanzee, and gorilla inferred from a coalescent hidden Markov model

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21 January 2018

What is the danger of the anomaly zone for empirical phylogenetics?

1 reference

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21 January 2018

Generating samples under a Wright-Fisher neutral model of genetic variation

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

A Likelihood-Ratio Test of Monophyly

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

MRBAYES: Bayesian inference of phylogenetic trees

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

Estimating species trees: methods of phylogenetic analysis when there is incongruence across genes.

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

STEM: species tree estimation using maximum likelihood for gene trees under coalescence.

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

BEST: Bayesian estimation of species trees under the coalescent model.

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

Estimating species trees using multiple-allele DNA sequence data

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

Maximum tree: a consistent estimator of the species tree.

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

Estimating species phylogenies using coalescence times among sequences.

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

Inferring phylogeny despite incomplete lineage sorting

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

Maximum likelihood estimates of species trees: how accuracy of phylogenetic inference depends upon the divergence history and sampling design

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

Incomplete lineage sorting: consistent phylogeny estimation from multiple loci.

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

Phylogenetic MCMC algorithms are misleading on mixtures of trees.

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

Does choice in model selection affect maximum likelihood analysis?

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

Dating of divergences within the Rattus genus phylogeny using whole mitochondrial genomes

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

Genome-scale approaches to resolving incongruence in molecular phylogenies

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

Strong evidence for lineage and sequence specificity of substitution rates and patterns in Drosophila

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

Species tree inference by minimizing deep coalescences

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ047

21 January 2018

The discovery of single-nucleotide polymorphisms--and inferences about human demographic history

1 reference

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21 January 2018

Identifiers

10.1093/SYSBIO/SYQ047

1 reference

Europe PubMed Central

28 July 2017

1 reference

Europe PubMed Central

28 July 2017

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